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Table 3 Sequence homology between vaccine candidate peptides of Mtb and Mi

From: A genomic analysis of Mycobacterium immunogenum strain CD11_6 and its potential role in the activation of T cells against Mycobacterium tuberculosis

S.No

Strains of Mycobacterium tuberculosis

Vaccine candidate peptides of secretory and membrane proteins

Similar peptides as vaccine candidates in Mi

Name of the protein these peptides belong

Sequence homology

1.

Rv0200 (+)

LVLLVVEGVAINFWLLRRD

45LLITQGMAINAYLARRD61

Possible membrane protein, Rv0200

14/17 (82%)

2.

Rv0200 (+)

QAARALRVTLTKRGSGWLV

203QSVLALRLTLAKHDGRWLV221

Possible membrane protein, Rv0200

12/19 (63%)

3.

Rv1280C (+)

DGYQDNSGVVAYNPEQAKRE

780DGYQDEWAAVLADPDKLRR798

Nitrite reductase [NAD(P)H] large subunit

12/19 (63%)

4.

Rv3630

LTRAPLLVPLTAMQGNLIAH

271 LTRAPLLVPLTALQGNLIAH290

Possible membrane protein

20/20 (100%)

5.

Rv3630

LTRAPLLVPLTAMQGNLIAH

4LTPLPVLIPLTAAALTLIA22

Na(+) H(+) antiporter subunit D

13/19 (68%)

6.

Rv0418 (+)

LKMAGKTAQDTSFDGRSDYD

388LAEQGKKAHDTGYDGRSDYD407

Aminopeptidase Y (Arg, Lys, Leu preference) (EC 3.4.11.15)

14/20 (70%)

7.

Rv0418 (+)

LKMAGKTAQDTSFDGRSDYD

389LNLAGKRPAAEEFSGRSDY407

Aminopeptidase Y (Arg, Lys, Leu preference) (EC 3.4.11.15)

11/19 (57%)

8.

Rv0418 (+)

VAAPADDSPGCSPSDYDRLP

144VPARAEESPGCTVEDYDGL162

Aminopeptidase Y (Arg, Lys, Leu preference) (EC 3.4.11.15)

14/19 (73%)

9.

Rv0418 (+)

VAAPADDSPGCSPSDYDRLP

28AAADDPPNCTPAD40

Exported protein

10/13 (76%)

10.

Rv1022

DGIANVDNIDDAALSAAGYL

193DGEPSPDNIDDAALSAAGYL212

Lipoprotein LpqU

17/20 (85%)

11.

Rv0566 (+)

TPDRITYRPQLGVLYPSELS

51TPERVTYRPELGVLYPSELS70

Possible membrane protein

20/20 (100%)

12.

Rv0566 (+)

TPDRITYRPQLGVLYPSELS

177DAIAYLPEFGVLYAGDL193

Fumarylacetoacetase (EC 3.7.1.2)

11/17 (64%)

13.

Rv0361

DAETETVVITTSDNDAAVTQ

189SEGRTVVLTTHDMDEAVS206

ABC transporter, ATP-binding protein

13/18 (72%)

14.

Rv0361

RSLDLQFRDDQWKITQSSSN

242RSFDLQFRDNQWKICQS258

Probable conserved membrane protein

15/17 (88%)

15.

Rv1326c (−)

MSRSEKLTGEHLAPEPAEMA

348ERLTVEHALPSPAEL362

NTD biosynthesis operon putative oxidoreductase NtdC

11/15 (73%)

16.

Rv1326c (−)

RFDGTPLYEHSDPKRGEQLD

359RFDGTPLYEHADPHRAEQLD378

1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)

18/20 (90%)