Table 1 Genomic islands and prophages present in the Pseudomonas aeruginosa 24Pae112 genome
Genomic island (GI) or prophage (PP) | Start | End | Size (bp) | GenBank accession numbera | % of 24Pae112 coverage | % of Identity |
|---|---|---|---|---|---|---|
H70 1st copy (PP) | 262,871 | 300,420 | 37,549 | NC_027384 | 80 | 91 |
H70 2nd copy (PP) | 5,678,768 | 5,716,362 | 37,594 | NC_027384 | 82 | 91 |
PM105 1st copy (PP) | 2,541,628 | 2,580,611 | 38,983 | NC_028667 | 79 | 98 |
PM105 2nd copy (PP) | 2,940,222 | 2,979,923 | 39,701 | NC_028667 | 82 | 97 |
D3 (PP) | 3,879,471 | 3,936,450 | 56,979 | NC_002484 | 44 | 95 |
F10 (PP)b | 5,053,812 | 5,092,700 | 38,888 | NC_007805 | 13 | 94 |
phiCTX (PP) | 705,252 | 724,278 | 19,026 | NC_003278 | 2 | 78 |
Pf1 (PP) | 5,347,267 | 5,358,785 | 11,518 | NC_001331 | 80 | 98 |
PAGI-1 (GI) | 3,366,957 | 3,406,228 | 39,271 | AF241171 | 76 | 99 |
PAGI-2 (GI) | 2,310,022 | 2,363,289 | 53,267 | AF440523 | 33 | 99 |
PAGI-4 (GI) | 4,795,506 | 4,895,009 | 99,593 | AY258138 | 61 | 99 |
PAGI-5 (GI)b | 5,752,816 | 5,853,757 | 100,941 | EF611301 | 70 | 99 |
PAGI-6 (GI) | 6,593,897 | 6,630,920 | 37,023 | EF611302 | 66 | 97 |
GI1 (GI)b | 2,403,928 | 2,472,004 | 68,076 | EU595750 | 91 | 99 |
PAGI-17 (GI)b | 2,724,254 | 2,841,225 | 116,971 | NC_018080 | 90 | 99 |