Skip to main content

Advertisement

Table 2 The cps1 gene cluster of K. oxytoca DSM 29614

From: Genomic traits of Klebsiella oxytoca DSM 29614, an uncommon metal-nanoparticle producer strain isolated from acid mine drainages

Gene (Locus tag) Start/Stop nucleotides Encoded Protein
id Function % of Identitya Comment
BI322_RS06885 549463/550359 WP_024360046.1 UTP-glucose-1-phosphate uridylyltransferase (GalF) 99  
BI322_RS06890 550820/551449 WP_082236967.1 acid phosphatase (phosphatidic acid phosphatase) 98  
BI322_RS06895 552089/552316 WP_082236968.1 hypothetical protein 0  
BI322_RS06900 552447/553886 WP_082236969.1 capsule assembly Wzi family protein (Wzi) 99  
BI322_RS06905 553960/555096 WP_082236970.1 polysaccharide export protein (Wza) 94 Wza is required for the translocation of capsular polysaccharide through the outer membrane.
BI322_RS06910 555098/555538 WP_082236971.1 protein tyrosine phosphatase (Wzb) 88 Wzb shows phosphatase activity towards the autophosphorylated Wzc protein, which induces colanic acid biosynthesis; catalyzes the phosphorylation of UDP-glucose dehydrogenase, an enzyme involved in colanic acid biosynthesis.
BI322_RS06915 555549/557714 WP_082236972.1 tyrosine-protein kinase (Wzc) 78 Wzc catalyzes the autophosphorylation on tyrosine residues which downregulates the biosynthesis of colonic acid (an extracellular polysaccharide).
BI322_RS06920 557836/559263 WP_082236973.1 undecaprenyl-phosphate galactose phosphotransferase (WbaP) 0  
BI322_RS06925 559308/560219 WP_082236974.1 rhamnosyltransferase 0  
BI322_RS06930 560570/561598 WP_082236975.1 hypothetical protein 31  
BI322_RS06935 561614/562714 WP_082236976.1 EpsG family protein 36 This family of proteins are related to the EpsG protein from Bacillus subtilis. These proteins are likely glycosyl transferases belonging to the membrane protein GT-C clan.
BI322_RS06940 562727/563569 WP_082236977.1 hypothetical protein 44 Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis.
BI322_RS06945 563574/564449 WP_082236978.1 hypothetical protein 99 Glycosyltransferase, GT2 family, putative dTDP-rhamnosyl transferase.
BI322_RS06950 564469/565359 WP_082236979.1 hypothetical protein 0 Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis.
BI322_RS06955 565408/566238 WP_082236980.1 hypothetical protein 36  
BI322_RS06960 566247/567692 WP_082236981.1 lipopolysaccharide biosynthesis protein (Wzx) 50 Membrane protein involved in the export of O-antigen and teichoic acid.
BI322_RS06965 568041/569447 WP_082236982.1 NADP-dependent phosphogluconate dehydrogenase (Gnd) 99 6-phosphogluconate dehydrogenase.
BI322_RS06970 569654/570718 WP_082236983.1 dTDP-glucose 4,6-dehydratase 99  
BI322_RS06975 570732/571601 WP_049099678.1 glucose-1-phosphate thymidylyltransferase 99  
BI322_RS06980 571633/572523 WP_082236984.1 dTDP-4-dehydrorhamnose reductase 99  
BI322_RS06985 572539/573093 WP_014230057.1 dTDP-4-dehydrorhamnose 3,5-epimerase 99  
BI322_RS06990 573267/574433 WP_082236985.1 UDP-glucose 6-dehydrogenase (Ugd) 99  
BI322_RS06995 57599/576603 WP_082236986.1 NAD-dependent epimerase 99  
  1. awith the products of K. oxytoca strain homologues