Skip to main content

Advertisement

Table 1 Summary of genome assembly and annotation features of A. solani, A. arborescens and A.brassicicola

From: Genome sequence of the potato pathogenic fungus Alternaria solani HWC-168 reveals clues for its conidiation and virulence

  A. arborescens
EGS39–128
A. brassicicola
ATCC 96836
A. solani
HWC-168
A. Solani
altNL03003
Genome
 Isolate EGS 39–128 ATCC 96836 HWC-168 altNL03003
 Coverage (fold) 90 6.4 508 > 150
 Genome size 33,889,384 bp 29,536,471 bp 32,838,780 bp 32,779,142 bp
 No. of contigs 1332 4039 209 10
 Largest contig length 1,056,452 bp 87,976 bp 1,075,562 bp 7,235,174 bp
 N50 contig length 310,869 18,835 564,368  
 G + C content (%) 50.9 50.7 51.2 51.2
Genes
 Number of genes 11,042 10,514 10,358  
 Gene density(genes/Mb) 325 356 323  
 Number of specific genes 1689 1883 1632