Skip to main content

Table 1 Summary of genome assembly and annotation features of A. solani, A. arborescens and A.brassicicola

From: Genome sequence of the potato pathogenic fungus Alternaria solani HWC-168 reveals clues for its conidiation and virulence

 

A. arborescens

EGS39–128

A. brassicicola

ATCC 96836

A. solani

HWC-168

A. Solani

altNL03003

Genome

 Isolate

EGS 39–128

ATCC 96836

HWC-168

altNL03003

 Coverage (fold)

90

6.4

508

> 150

 Genome size

33,889,384 bp

29,536,471 bp

32,838,780 bp

32,779,142 bp

 No. of contigs

1332

4039

209

10

 Largest contig length

1,056,452 bp

87,976 bp

1,075,562 bp

7,235,174 bp

 N50 contig length

310,869

18,835

564,368

 

 G + C content (%)

50.9

50.7

51.2

51.2

Genes

 Number of genes

11,042

10,514

10,358

 

 Gene density(genes/Mb)

325

356

323

 

 Number of specific genes

1689

1883

1632

Â