Table 4 Highest nucleotide identities for each gene segment of the Lopburi02 orthoreovirus retrieved from the BLAST search
Segment | Encoded protein | % identity | Ref. strain | Host | Country | Year | Acc. no. |
|---|---|---|---|---|---|---|---|
L1 | λC or λ3 | 93.5 | Pulau | Bat | Malaysia | 1999 | JF342666.1 |
92.9 | Cangyuan | Bat | China | 2012 | KM382259.1 | ||
L2 | λB or λ2 (RNA pol) | 98.2 | Cangyuan | Bat | China | 2012 | KM382260.1 |
L3 | λA or λ1 | 97.9 | Melaka | Human | Malaysia | 2006 | JF342662.1 |
M1 | μA or μ1 | 96.2 | Kampar | Human | Malaysia | 2006 | JF342657.1 |
95.8 | Melaka | Human | Malaysia | 2006 | JF342663.1 | ||
M2 | μB or μ2 | 95.8 | Melaka | Human | Malaysia | 2006 | JF342664.1 |
M3 | μNS | 98.9 | Cangyuan | Bat | China | 2012 | KM382264.1 |
S1 | p10, p17 and σC | 95.5 | Sikamat | Human | Malaysia | 2010 | JF811580.1 |
S2 | σA or σ1 | 98.7 | Kampar | Human | Malaysia | 2006 | EU448335.1 |
S3 | σNS | 97.7 | Cangyuan | Bat | China | 2012 | KM382267.1 |
97.7 | Xi river | Bat | China | 2010 | GU188275.1 | ||
S4 | σB or σ2 | 97.2 | Sikamat | Human | Malaysia | 2010 | JF811583.1 |
96.7 | Cangyuan | Bat | China | 2012 | KM382268.1 |