Table 1 Bacterial strains used for the inclusivity and exclusivity tests in this study
Bacterial species | Strain | Source | Detection result by qPCR |
|---|---|---|---|
Staphylococcus aureus (n = 20) | ATCC 25923 | ATCCa | + |
SA1011 # | Flour product | + | |
SA1012 # | Pork | + | |
SA1013 # | Frozen corn | + | |
SA1014 # | Raw milk | + | |
SA1015 # | Raw milk | + | |
SA1016 # | Raw milk | + | |
SA1017 # | Human (sputum) | + | |
SA1018 # | Human (blood) | + | |
SA1019 # | Human (pus) | + | |
SA1020 # | Human (wound) | + | |
SA1131 # | Human (sputum) | + | |
SA1132 # | Flour product | + | |
SA1133 # | Pork | + | |
SA1134 # | Frozen corn | + | |
SA1135 # | Raw milk | + | |
SA1136 # | Pig | + | |
SA1137 # | Pork | + | |
SA1138 # | Pig | + | |
SA1139 # | Raw milk | + | |
SA1140 # | Raw milk | + | |
Salmonella Typhimurium | ATCC 14028 | ATCC | – |
Salmonella Typhimurium | CICC21484 | CICCb | – |
Salmonella Enteritidis | CICC24119 | CICC | – |
Escherichia coli | ATCC 25922 | ATCC | – |
Listeria monocytogenes | CMCC54002 | CMCCc | – |
Listeria grayi | ATCC 25401 | ATCC | – |
Listeria seeligeri | ATCC 35967 | ATCC | – |
Listeria welshimeri | ATCC 35897 | ATCC | – |
Listeria ivanovii (n = 7) | ATCC 19119 | ATCC | – |
CMCC89001 | CMCC | – | |
VP61 # | Human (anal swab) | – | |
VP65 # | Restaurant | – | |
VP67 # | Trout | – | |
VP105 # | Bass | – | |
VP106 # | Clams | – | |
Vibrio parahemolyticus | VP108 # | Cuttlefish | – |
Streptococcus hemolyticus | ATCC 21059 | ATCC | – |
Campylobacter jejuni (n = 4) | ATCC 33291 | ATCC | – |
ATCC 43464 | ATCC | – | |
CJ2 # | Human | – | |
CJ12 # | Chicken | – | |
Clostridium perfringens | ATCC 13124 | ATCC | – |
Bacillus cereus | ATCC 11778 | ATCC | – |
Pseudomonas aeruginosa | ATCC 27853 | ATCC | – |