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Table 2 Summary of predicted prophages in 7 sequenced TIFN strains

From: Spontaneously induced prophages are abundant in a naturally evolved bacterial starter culture and deliver competitive advantage to the host

STRAIN

NAME

REGION LENGTH

COMPLETENESS

MOST SIMILAR

DETAILS

TIFN1

proΦ1_1

56.1Kb

intact

Lactococcus phage bIL309

integrase, capsid, tail, portal, terminase, protease

proΦ1_2

49.2Kb

questionable

Lactococcus phage TP901–1

integrase, transposase, terminase, lysin

TIFN2

proΦ2_1

43Kb

intact

Lactococcus phage bIL309

integrase, capsid, tail, portal, terminase, protease, lysin

proΦ2_2

57.7Kb

intact

Lactococcus phage bIL309

integrase, tail, portal, terminase, protease

TIFN3

proΦ3

36.8Kb

questionable

integrase, transposase

TIFN4

proΦ4_1

44.1Kb

intact

Lactococcus phage bIL309

integrase, capsid, tail, portal, terminase, protease

proΦ4_2

60Kb

intact

Lactococcus phage bIL309

integrase, tail, portal, terminase, protease

TIFN5

proΦ5_1

47.5Kb

questionable

Lactococcus phage TP901–1

integrase, transposase, terminase

proΦ5_2

31Kb

intact

Lactococcus phage bIL309

integrase, capsid, tail, portal, terminase, protease

TIFN6

proΦ6_1

31Kb

questionable

Lactococcus phage TP901–1

tail, transposase, terminase, Lysin

proΦ6_2

60.7Kb

intact

Lactococcus phage bIL309

integrase, capsid, tail, transposase, head, portal, terminase, protease, lysin

TIFN7

proΦ7_2

42.1Kb

questionable

Lactococcus phage phiLC3

capsid, transposase, terminase

proΦ7_3

43.8Kb

questionable

transposase, terminase