Table 1 PCR primers used in this study
target prophage | code | name | Sequence |
|---|---|---|---|
proΦ1 | P1 | pro1-Inch5F | GTTGTGGAGACTTGACGCAGCAA |
P2 | pro1-Inch5R | CCTTCAAAACCTAGAAAATGGC | |
P3 | pro1-Inch3F | GGATGAGAAAAACATTCAATTACAAACA | |
P4 | pro1-Inch3R | CATCAATGAACGTTTATACCCATATTAC | |
strain specific | TIFN1&5f | TCGCTGTCATTGGTATCAGC | |
TIFN1&5f | CCAAATTCCGCAGTGTTTTC | ||
proΦ2/4 | P1 | pro2-Inch5F | ATGTTGAAATCAATGACGACTCAGTT |
P2 | pro2-Inch5R | CACGTTACTAAAAAGGCAAAAAAAGAT | |
P3 | pro2-Inch3F | CGTCGATTGAATGCGAATAAACTAT | |
P4 | pro2-Inch3R | CAATATACTGTCACACACTCAAAGAC | |
strain specific | TIFN2&4f | TGGCTTAGTATTGGCACCTCA | |
TIFN2&4r | AGCTGTTCGACCGACACTTT |