Strain or plasmid | Relevant characteristicsa | Source or Reference |
---|---|---|
Escherichia coli | ||
 DH5α | supE44 ΔlacU169(Φ80lacZΔM15) hsdR17 recA1 endA1 gyrA96 thi-1 relA1 | [49] |
 BL21 | For protein expression | Novagen |
Xanthomonas oryzae pv. oryzae | ||
 PXO99A | Wildtype strain, Philippine race 6 | Lab collection |
 ∆fliTX | fliTX gene deletion mutant derived from PXO99A | This study |
 ∆fliTX-C | Complementary strain of ∆fliTX, Apr | This study |
 ∆rpoN2 | rpoN2 gene deletion mutant derived from PXO99A, Gmr | Our lab |
 ∆rpoN2-C | Complementary strain of ∆rpoN2, Apr | Our lab |
 ∆fleQ | fleQ gene deletion mutant derived from PXO99A, Gmr | Our lab |
 ∆fleQ-C | Complementary strain of ∆fleQ, Apr | Our lab |
 ∆fliA | fliA gene deletion mutant derived from PXO99A, Gmr | Our lab |
 ∆fliA-C | Complementary strain of ∆fliA, Apr | Our lab |
Plasmid | ||
 pMD18-T | Cloning vector, Apr | TaKaRa, Tokyo |
 pKMS1 | Suicidal vector carrying sacB gene for non-marker mutagenesis, Kmr | [45] |
 pBBR1MCS-4 | Broad-host range expression vector, Apr | [50] |
 pHT304BZ | Promoterless lacZ vector, Apr | [41] |
 pHTpS | pHT304BZ derivative carrying the promoter region of fliS, Apr | This study |
 pHM1 | Broad-host range expression vector, Spr | [42] |
 pH-fliSp-lacZ | pHM1 derivative carrying the promoter region of fliS and promoterless lacZ, Spr | This study |
 pET-28a | Expression vector to generate a N-terminal His6 tag, Kmr | Haigene |
 pET-fliTX | pET-28a derivative carrying fliTX, Kmr | This study |
 pPROBE-AT | broad-host-range vector carrying a promoter-less gfp gene, Apr | [47] |
 pPhrpG | pPROBE-AT derivative carrying the promoter region of hrpG and promoterless gfp, Apr | This study |
 pPhrpX | pPROBE-AT derivative carrying the promoter region of hrpX and promoterless gfp, Apr | This study |
 pPhpa1 | pPROBE-AT derivative carrying the promoter region of hpa1 and promoterless gfp, Apr | Our lab |