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Table 2 Top 12 functional classification of the DEGs of B. pumilus BA06 during the entire growth curve by RAST analysis

From: Transcriptome profiling analysis reveals metabolic changes across various growth phases in Bacillus pumilus BA06

Subsystems in MM in GM
12/04 24/12 48/24 72/48 12/04 24/12 48/24 72/48
Carbohydrates 98 2 45 5 79 1 37 22
Amino Acids and Derivatives 42 2 44 1 45 8 29 12
Motility and Chemotaxis 55 7 55 5 55 10 34 33
Cofactor/Vitamin/Prosthetic Group 28 4 12 0 28 1 15 23
Clustering-based Subsystems 25 0 28 0 27 1 42 17
Dormancy and Sporulation 20 0 59 0 16 0 34 31
Cell Wall and Capsule 16 1 17 2 14 0 10 16
Iron Acquisition and Metabolism 18 2 9 0 22 0 14 14
Stress Response 16 0 13 2 13 0 15 13
Nucleosides and Nucleotides 16 1 4 1 16 0 5 7
Protein Metabolism 11 1 14 1 10 0 17 8
Respiration 12 0 6 0 12 0 4 2