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Table 1 Number of genes and amino acids used in the OrthoMCL clustering

From: Insights into the Geobacillus stearothermophilus species based on phylogenomic principles

Subseta

Members of group

Same length and same sequence

Same length and different sequence

Cluster lengthb

Total number of core genes

  

Genes

Amino acids

Genes

Amino acids

Genes

Amino acids

 

A

All Geobacillus

1

116

58

7678

390c

81,812

391

B

Groups 1 – 6d

7

865

131

19,180

478c

99,197

485

C

G. stearothermophilus group

138

19,490

992

277,724

1524c

446,984

1662

  1. aRefer also to Fig. 1
  2. bTo be in an orthologous cluster, genes had to have a length range of 20% across all cluster members, and only one member per strain
  3. cThis number of genes was used in the Neighbor-Net analysis
  4. dRefer to Fig. 1 for strains included in each group
  5. eIncludes strains ATCC 12980, ATCC 7953, LC300, 12AMORI, 22, 53, Sah69, A1, P3, D1, B4109, B4114