Skip to main content

Table 1 List of L. monocytogenes isolates analyzed in this study

From: Whole genome sequencing analyses of Listeria monocytogenes that persisted in a milkshake machine for a year and caused illnesses in Washington State

Isolate ID Collection time Source Type AscI-PFGE pattern ApaI-PFGE pattern SRA ID or GenBank Accession
PNUSAL001207 November, 2014 Clinical AscI-P1 ApaI-P1 SRR1745448
PNUSAL001241 December, 2014 Clinical AscI-P2 ApaI-P1 SRR1745474
CFSAN028842 December, 2014 Ice cream/Hospital X AscI-P1 ApaI-P1 SRR3130313
CFSAN028843 December, 2014 Ice cream/Hospital X AscI-P1 ApaI-P1 SRR3091402
CFSAN028844 December, 2014 Ice cream/Hospital X AscI-P1 ApaI-P1 SRR3130327
CFSAN028845 December, 2014 Ice cream/Hospital X AscI-P1 ApaI-P1 SRR3066080
CFSAN028846 December, 2014 Ice cream/Hospital X AscI-P1 ApaI-P1 SRR3130329
CFSAN028847 December, 2014 Ice cream/Hospital X AscI-P1 ApaI-P1 SRR3091403
CFSAN028848 December, 2014 Ice cream/Company A AscI-P1 ApaI-P1 SRR3091404
CFSAN028849 December, 2014 Ice cream/Company A AscI-P1 ApaI-P1 SRR3091405
CFSAN028850 December, 2014 Ice cream/Company A AscI-P1 ApaI-P1 SRR3130331
CFSAN028851 December, 2014 Ice cream/Company A AscI-P1 ApaI-P1 SRR3091406
CFSAN028852 December, 2014 Environmental/Company A AscI-P1 ApaI-P1 SRR3130333
CFSAN028853 December, 2014 Environmental/Company A AscI-P1 ApaI-P1 SRR3130335, MAKW00000000.1
CFSAN028855 December, 2014 Environmental/Company A AscI-P1 ApaI-P1 SRR3130404
CFSAN028856 December, 2014 Environmental/Company A AscI-P1 ApaI-P1 SRR3130406
CFSAN028857 December, 2014 Environmental/Company A AscI-P3 ApaI-P1 SRR3130409
CFSAN028858 December, 2014 Environmental/Company A AscI-P1 ApaI-P1 SRR3130413
CFSAN028859 December, 2014 Environmental/Company A AscI-P1 ApaI-P1 SRR3130415
CFSAN028860 December, 2014 Environmental/Company A AscI-P1 ApaI-P1 SRR3130350
CFSAN028861 December, 2014 Environmental/Company A AscI-P2 ApaI-P1 SRR3130375
CFSAN029502 December, 2014 Environmental/Company A AscI-P1 ApaI-P1 SRR3130341
CFSAN030692 March, 2015 Environmental/Company A AscI-P1 ApaI-P1 SRR1974103
CFSAN032836 April, 2015 Environmental/Company B AscI-P1 ApaI-P1 SRR2035442
CFSAN043359 November, 2015 Ice cream/Hospital X AscI-P1 ApaI-P1 SRR3052035
CFSAN043360 November, 2015 Ice cream/Hospital X AscI-P1 ApaI-P1 SRR3053137
CFSAN043361 November, 2015 Ice cream/Hospital X AscI-P1 ApaI-P1 SRR3086932
CFSAN043362 November, 2015 Environmental/Hospital X AscI-P1 ApaI-P1 SRR3086935
CFSAN043363 November, 2015 Environmental/Hospital X AscI-P1 ApaI-P1 SRR3086936
CFSAN043364 November, 2015 Environmental/Hospital X AscI-P1 ApaI-P1 SRR3052036
PNUSAL001911 November, 2015 Clinical AscI-P1 ApaI-P1 SRR2994642
CFSAN028854 December, 2014 Environmental/Company A AscI-P4 ApaI-P2 SRR3130337
CFSAN004336 NA Food NA NA SRR1818032