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Table 1 List of L. monocytogenes isolates analyzed in this study

From: Whole genome sequencing analyses of Listeria monocytogenes that persisted in a milkshake machine for a year and caused illnesses in Washington State

Isolate ID

Collection time

Source Type

AscI-PFGE pattern

ApaI-PFGE pattern

SRA ID or GenBank Accession

PNUSAL001207

November, 2014

Clinical

AscI-P1

ApaI-P1

SRR1745448

PNUSAL001241

December, 2014

Clinical

AscI-P2

ApaI-P1

SRR1745474

CFSAN028842

December, 2014

Ice cream/Hospital X

AscI-P1

ApaI-P1

SRR3130313

CFSAN028843

December, 2014

Ice cream/Hospital X

AscI-P1

ApaI-P1

SRR3091402

CFSAN028844

December, 2014

Ice cream/Hospital X

AscI-P1

ApaI-P1

SRR3130327

CFSAN028845

December, 2014

Ice cream/Hospital X

AscI-P1

ApaI-P1

SRR3066080

CFSAN028846

December, 2014

Ice cream/Hospital X

AscI-P1

ApaI-P1

SRR3130329

CFSAN028847

December, 2014

Ice cream/Hospital X

AscI-P1

ApaI-P1

SRR3091403

CFSAN028848

December, 2014

Ice cream/Company A

AscI-P1

ApaI-P1

SRR3091404

CFSAN028849

December, 2014

Ice cream/Company A

AscI-P1

ApaI-P1

SRR3091405

CFSAN028850

December, 2014

Ice cream/Company A

AscI-P1

ApaI-P1

SRR3130331

CFSAN028851

December, 2014

Ice cream/Company A

AscI-P1

ApaI-P1

SRR3091406

CFSAN028852

December, 2014

Environmental/Company A

AscI-P1

ApaI-P1

SRR3130333

CFSAN028853

December, 2014

Environmental/Company A

AscI-P1

ApaI-P1

SRR3130335, MAKW00000000.1

CFSAN028855

December, 2014

Environmental/Company A

AscI-P1

ApaI-P1

SRR3130404

CFSAN028856

December, 2014

Environmental/Company A

AscI-P1

ApaI-P1

SRR3130406

CFSAN028857

December, 2014

Environmental/Company A

AscI-P3

ApaI-P1

SRR3130409

CFSAN028858

December, 2014

Environmental/Company A

AscI-P1

ApaI-P1

SRR3130413

CFSAN028859

December, 2014

Environmental/Company A

AscI-P1

ApaI-P1

SRR3130415

CFSAN028860

December, 2014

Environmental/Company A

AscI-P1

ApaI-P1

SRR3130350

CFSAN028861

December, 2014

Environmental/Company A

AscI-P2

ApaI-P1

SRR3130375

CFSAN029502

December, 2014

Environmental/Company A

AscI-P1

ApaI-P1

SRR3130341

CFSAN030692

March, 2015

Environmental/Company A

AscI-P1

ApaI-P1

SRR1974103

CFSAN032836

April, 2015

Environmental/Company B

AscI-P1

ApaI-P1

SRR2035442

CFSAN043359

November, 2015

Ice cream/Hospital X

AscI-P1

ApaI-P1

SRR3052035

CFSAN043360

November, 2015

Ice cream/Hospital X

AscI-P1

ApaI-P1

SRR3053137

CFSAN043361

November, 2015

Ice cream/Hospital X

AscI-P1

ApaI-P1

SRR3086932

CFSAN043362

November, 2015

Environmental/Hospital X

AscI-P1

ApaI-P1

SRR3086935

CFSAN043363

November, 2015

Environmental/Hospital X

AscI-P1

ApaI-P1

SRR3086936

CFSAN043364

November, 2015

Environmental/Hospital X

AscI-P1

ApaI-P1

SRR3052036

PNUSAL001911

November, 2015

Clinical

AscI-P1

ApaI-P1

SRR2994642

CFSAN028854

December, 2014

Environmental/Company A

AscI-P4

ApaI-P2

SRR3130337

CFSAN004336

NA

Food

NA

NA

SRR1818032