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Table 2 Antibiotic resistance gene profile of Enterococcus spp. isolated from bovine feces. Values represent % pairwise identity

From: Comparative genomics of Enterococcus spp. isolated from bovine feces

Resistance gene

aph(3′)-III

aac(6′)-Ii

aac(6′)-Iid

aac(6′)-Iih

ant(9) -Ia

adeC

erm(B)

msrC

lsa(A) a

lsa(E)

lnu(B)

tet(L)

tet(M)

tet(O)

sat4

vanC operon b

Strain

                

E. hirae 1

   

99.5

  

100

    

100

96.5

   

E. hirae 2

   

99.5

  

100

         

E. hirae 3

   

100

  

100

      

93.0

  

E. hirae 4

   

98.9

  

100

      

100

  

E. hirae 5

   

100

  

99.5

      

91.4

  

E. hirae 6

   

100

            

E. hirae 7

   

99.5

            

E. hirae 8

   

100

            

E. hirae 9

   

98.9

         

96.9

  

E. hirae 10

   

100

         

92.8

  

E. faecium 11

100

100

  

100

99.9

100

98.9

 

98.9

99.9

100

95.1

 

99.0

 

E. faecium 12

 

100

   

92.9

 

95.4

        

E. faecium 13

 

99.8

   

99.8

 

99.3

        

E. thailandicus 14

                

E. villorum 15

                

E. villorum 16

      

99.6

    

100

    

E. faecalis 17

        

99.5

       

E. gallinarum 18

      

98.6

        

present

E. durans 19

  

100

             

E. casseliflavus 20

               

present

E. casseliflavus 21

      

98.6

        

present

  1. aIntrinsic to E. faecalis
  2. b vanC operon consists of vanC, vanR-C, vanS-C, vanXY-C and is intrinsic to E.gallinarum and E. casseliflavus; GenBank accession numbers for resistance genes: aph(3′)-III (M26832.1), aac(6′)-Ii (L12710.1), aac(6′)-Iid (AJ584701.2), aac(6′)-Iih (AJ584700.2), ant(9)-Ia (JQ861959.1), adeC (CP003583.1), erm(B) (U86375.1), msrC (AY004350.1), lsa(A) (AY225127.1), lsa(E) (JX560992.1), lnu(B) (AJ238249.1), tet(L) (M29725.1), tet(M) (EU182585.1), tet(O) (Y07780.1), tet(32) (AJ295238.3), sat4 (U01945.1), vanC operon E. gallinarum (AF162694.1), vanC operon E. casseliflavus (EU151753.1)