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Table 2 Representation of the entire set of species included in the Bruker reference spectrum database

From: Decision criteria for MALDI-TOF MS-based identification of filamentous fungi using commercial and in-house reference databases

Species not represented in the Bruker reference database

Total (n = 155)

List of the 26 species represented once or twice in the Bruker reference database

Total (n = 76)

List of the 25 species represented three or more times in the Bruker reference database

Total (n = 191)

Acremonium breve

1

Acremonium strictum

6

Alternaria alternata

2

Alternaria infectoria

2

Aspergillus clavatus

2

Aspergillus flavus

15

Arthrinium arundinis

1

Aspergillus hollandicus

5

Aspergillus fumigatus

20

Aspergillus alabamensis

4

Aspergillus sclerotiorum

3

Aspergillus nidulans

8

Aspergillus caesiellus

1

Aspergillus sydowii

6

Aspergillus niger

4

Aspergillus calidoustus

10

Aspergillus tamarii

2

Aspergillus parasiticus

2

Aspergillus carbonarius

1

Aspergillus unguis

4

Aspergillus terreus

10

Aspergillus carneus

1

Beauveria bassiana

3

Aspergillus versicolor

3

Aspergillus chevalieri

4

Cladosporium cladosporioides

1

Aureobasidium pullulans

3

Aspergillus creber

1

Curvularia lunata

2

Exophiala dermatitidis

2

Aspergillus dimorphicus

1

Epicoccum nigrum

2

Fusarium oxysporum

21

Aspergillus fischeri

2

Fusarium dimerum

2

Fusarium proliferatum

10

Aspergillus flavipes

3

Fusarium equiseti

1

Fusarium solani

7

Aspergillus floccosus

3

Fusarium verticillioides

1

Lichtheimia corymbifera

2

Aspergillus fumigatiaffinis

2

Galactomyces geotrichum

2

Microsporum canis

2

Aspergillus hiratsukae

1

Mucor circinelloides

5

Purpureocillium lilacinus

3

Aspergillus iizukae

1

Penicillium citrinum

5

Paecilomyces variotii

3

Aspergillus insuetus

1

Penicillium corylophilum

4

Penicillium chrysogenum

27

Aspergillus nomius

1

Penicillium funiculosum

2

Penicillium expansum

2

Aspergillus quadrilineatus

1

Penicillium purpurogenum

1

Penicillium glabrum

9

Aspergillus ruber

2

Penicillium rugulosum

1

Scedosporium apiospermum

11

Aspergillus subolivaceus

1

Rhizopus microsporus

1

Schizophyllum commune

4

Aspergillus tubingensis

29

Rhizopus oryzae

6

Scopulariopsis brevicaulis

15

Aspergillus westerdijkiae

1

Scedosporium aurantiacum

6

Trichophyton interdigitale

1

Cladosporium bruhnei

1

Scedosporium prolificans

3

Trichophyton rubrum

8

Cladosporium halotolerans

2

Trichoderma longibrachiatum

2

  

Cladosporium pseudocladosporioides

2

    

Cladosporium sphaerospermum

1

    

Cochliobolus hawaiiensis

2

    

Colletotrichum lineola

1

    

Fomitopsis pinicola

2

    

Fusarium sacchari

1

    

Geosmithia argillacea

1

    

Geosmithia pallida

1

    

Hexagonia hydnoides

1

    

Trichoderma orientale

1

    

Lecythophora sp.

1

    

Macrophomina phaseolina

1

    

Microsporum audouinii

1

    

Mucor hiemalis

1

    

Penicillium asturianum

1

    

Penicillium atramentosum

1

    

Penicillium brasilianum

3

    

Penicillium cecidicola

2

    

Penicillium concentricum

1

    

Penicillium crateriforme

2

    

Penicillium crustosum

3

    

Penicillium diversum

1

    

Penicillium griseofulvum

1

    

Penicillium helicum

1

    

Talaromyces marnefei

1

    

Penicillium nalgiovense

1

    

Penicillium oxalicum

1

    

Penicillium pinophilum

3

    

Penicillium polonicum

6

    

Penicillium raistrickii

1

    

Penicillium rolfsii

1

    

Penicillium sizovae

2

    

Penicillium spinulosum

2

    

Penicillium terrigenum

1

    

Penicillium variabile

2

    

Phaeosphaeria avenaria

1

    

Phanerochaete chrysosporium

2

    

Pithomyces chartarum

3

    

Pleospora papaveracea

1

    

Scedosporium boydii

1

    

Pseudallescheria ellipsoidea

1

    

Rhizomucor pusillus

2

    

Rhizomucor variabilis

2

    

Trichoderma reesei

2

    

Tyromyces fissilis

3