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Fig. 1 | BMC Microbiology

Fig. 1

From: Evaluation of MLVA for epidemiological typing and outbreak detection of ESBL-producing Escherichia coli in Sweden

Fig. 1

PFGE profile in relation to MLVA profile for isolates belonging to the O25b-ST131 linage. PFGE profile in relation to MLVA profile for 34 ESBL-E. coli isolates, including both sporadic cases and the outbreak isolates (shaded in grey) belonging to the O25b-ST131 lineage and its subclone H30Rx (pos). Names of PFGE-type using > 80% similarity index are given. The GECM profile corresponds to the number of repeats in the following loci; CVN 001, CVN 002, CVN 003, CVN 004, CVN 007, CVN 014, CVN 015, CCR 001, CVN 016 and CVN 017. N denotes no PCR-product and 0 denotes that no repeats could be calculated. The GECM-7 types are given, which correspond to MLVA using the first seven loci of GECM-10. Resistance (R) or sensitivity (S) for ciprofloxacin, trimethoprim and tobramycin

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BMC Microbiology

ISSN: 1471-2180

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