Enrichment dynamics of Listeria monocytogenes and the associated microbiome from naturally contaminated ice cream linked to a listeriosis outbreak

Table 1 Shotgun data for potential target assemblies

Broth Type-Hour	Listeria Genome size (bp)	Size of the genome covered	Listeria read representations	Total sample reads	Predicted depth (x)	% Genome coverage
U-24 h	3109342	738261.44	59165	30102152	12.02	23.74
H-24 h	3109342	2280235.96	115521	15195488	7.6	73.34
B-24 h	3109342	3023679.63	239719	35204116	11.89	97.25
U-28 h	3109342	1360440.77	132749	81801390	14.64	43.75
H-28 h	3109342	3029431.91	419418	20818100	20.77	97.43
B-28 h	3109342	2981548.04	1884038	46165270	94.78	95.89

B BLEB, H HFB-FB, U UVM-FB
Shotgun sequence data are shown for hours 24 and 28 for all three enrichments. The target L. monocytogenes genome size is 3,109,342 bases

ISSN: 1471-2180