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Table 1 Synthetic oligonucleotides

From: Inactivation of MSMEG_0412 gene drastically affects surface related properties of Mycobacterium smegmatis

Name

Sequence (5′ - 3′)a

Position of Annealingb

0412-S

CATGATCCCCGAGGAGCAC

+857/+875

0412-A

TTGCCGTTCAAGTACCTCGG

+889/+90

0412-Fw

AAAGCTAGCATGAGGAGACGACTTCTCGCGTTC

+1/+24

0412-spFw

AAAGCTAGCGATGACACCAAACCGGTCG

+85/+103

0412-Rv

AAAGCTAGCTCAGGGCTTGGGCGCCGGTTG

+1132/+1152

0412-gfpRv

AAAGCTAGCGGGCTTGGGCGCCGGTTG

+1132/+1149

0412-1F

CTAGAAGCTTGCACCGCACTGGTGAGATA

-690/-672

0412-1R

CTAGGGTACCCGCTGTAGTCCTCTGCT

-5/+12

0412-2F

CTAGGGTACCGGACTGCAGTACGTCGTGAACA

+1108/+1129

0412-2R

CTAGGGTACCACCATGTGGATCCCTCTCCT

+1818/+1837

  1. aUnderlined is an unpaired tail carrying a restriction site
  2. bPosition of annealing refers to msmeg_0412 gene sequence, with the first base of the translational initiation codon as +1