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Table 1 Primers sequences used in this study

From: Comparison of antibiotic resistant Escherichia coli obtained from drinking water sources in northern Tanzania: a cross-sectional study

Primer

Nucleotide sequence

Reference

uidA

LGO_uidA F-5′-GACCCACACTTTGCCGTAAT-3′

This study

LGO_uidA R-5′-AGTCTGGATCGCGAAAACTG-3′

CTX-M

F- 5′-TTTGCGATGTGCAGTACCAGTAA-3′

[22]

R-5′-CGATATCGTTGGTGGTGCCATA-3′

CTX-M-1 group

F-5′-GGT TAA AAA ATC ACT GCG TC-3′

[22]

R-5′-TTG GTG ACG ATT TTA GCC GC-3′

CTX-M-2 group

F- 5′-ATG ATG ACT CAG AGC ATT CG-3′

[22]

R-5′-TGG GTT ACG ATT TTC GCC GC-3′

CTX-M-9, Toho-2 group

F-5′-ATG GTG ACA AAG AGA GTG CA-3′

[22]

R-5′-CCC TTC GGC GAT GAT TCT C-3′

bla SHV

F-5′-AGGATTGACTGCCTTTTTG-3′

[41]

R-5′-ATTTGCTGATTTCGCTCG-3′

bla TEM

F-5′-ATCAGCAATAAACCAGC-3′

[41]

R-5′-CCCCGAAGAACGTTTTC-3′

tet(A)

F-5′-GAAACCCAACATACCCCTGA-3′

This study

R-5′-GAAGCTGAGCGGGTTGAGAG-3′

tet(B)

F-5′-GTTCGACAAAGATCGCATTG-3′

This study

R-5′-TCTGTATTATCACGTGTATTTTTGG-3′