Primer | Nucleotide Sequence (5’-3’) | Amplicon size (bp) | Reference |
---|---|---|---|
16S rRNA | Fwd-AAGAGAGACTAACGCATGTTAGTAAT Rev-ATTTTCCACTCCCACCATCA | 300 | This study |
V-Na+-ATPase | Fwd-GTCGATTTTGCCACGTACCG Rev -TGCATGGTCAACTCAATCATTTGC | 121 | Hung et al. 2012 [27] |
Vir | SBR-AGACATGAGCGCAATGGCAAGTTTATCAAATGGTAATTTTTG VUF-AAACCGTATCTTTGACGCACTCGAGGACAATTTGCGAGATTAG | Variable | Gardiner et al. 1995 [29] |
emm | Primer1 –TATT(C/G)GCTTAGAAAATTAA Primer 2– GCAAGTTCTTCAGCTTGTTT | Variable | CDC a |
emm conserved | Fwd-AATARACASTATTCGCTTAGAAAATTA Rev-GCTTAGTTTTCTTCTTTGCG | Variable | This study |