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Table 4 Cross-study comparison of the nine LCP proteins from E. hirae, B. subtilis and S. aureus

From: Enterococcus hirae LcpA (Psr), a new peptidoglycan-binding protein localized at the division site

 

E.hirae_LcpA

E.hirae_LcpB

E.hirae_LcpC

B.subtilis_TagT

B.subtilis_TagV

B.subtilis_TagU

S.aureus_LcpA

S.aureus_LcpB

S.aureus_LcpC

293 AA

395 AA

405 AA

322 AA

306 AA

391 AA

327 AA

405 AA

307 AA

E.hirae_LcpA

 

292/293

246/293

183/293

231/293

200/293

243/293

271/293

182/293

E = 7.10−85

E = 1.10−33

E = 3.10−33

E = 4.10−31

E = 1.10−28

E = 1.10−68

E = 3.10−22

E = 8.10−30

E.hirae_LcpB

135/292

 

211/395

160/322

160/306

182/391

257/327

156/395

146/307

46,23%

E = 2.10−23

E = 1.10−23

E = 6.10−28

E = 6.10−23

E = 3.10−67

E = 2.10−19

E = 3.10−21

E.hirae_LcpC

78/246

63/211

 

295/322

279/306

289/391

184/327

270/405

289/307

31,71%

29,85%

E = 5.10−46

E = 1.10−79

E = 2.10−42

E = 1.10−26

E = 4.10−40

E = 7.10−61

B.subtilis_TagT

74/183

56/160

101/295

 

281/306

286/322

156/322

262/322

301/307

40,43%

35%

34,24%

E = 2.10−50

E = 1.10−52

E = 8.10−25

E = 1.10−57

E = 2.10−33

B.subtilis_TagU

78/231

58/160

118/279

106/281

 

280/306

209/306

276/306

289/306

33,77%

36,25%

42,29%

37,72%

E = 4.10−63

E = 1.10−28

E = 3.10−44

E = 2.10−74

B.subtilis_TagV

72/200

64/182

92/289

109/286

116/280

 

184/327

289/391

305/307

36%

35,16%

31,83%

38,11%

41,43%

E = 2.10−30

E = 1.10−47

E = 3.10−43

S.aureus_LcpA

103/243

112/257

64/184

59/156

68/209

72/184

 

189/327

188/307

42,39%

43,58%

34,78%

37,82%

32,54%

39,13%

E = 9.10−21

E = 8.10−25

S.aureus_LcpB

79/271

55/156

88/270

106/262

95/276

101/289

60/189

 

263/307

29,15%

35,26%

32,59%

40,46%

34,42%

34,95%

31,75%

E = 4.10−38

S.aureus_LcpC

69/182

47/146

108/289

89/301

120/289

95/305

65/188

86/263

 

37,91%

32,19%

37,37%

29,57%

41,52%

31,15%

34,57%

32,70%

  1. The comparison was realized with « blast2seq » using default settings. The values below the main diagonal represent, respectively, the ratio between the conserved residues and the length of the smallest sequence aligned without gap and the percentage of identity between both sequences. The values above the main diagonal represent, respectively, the ratio between the number of residues of the shortest sequence aligned without gap and the number of residues of the shortest sequence before alignment, and the expected « E » value