|
Protein
|
Outer membrane localization/β-barrel conformationa
|
Signal sequenceb
|
|---|
|
CELLO
|
PSORTb
|
HHOMP
|
TMBETADISC -ACC
|
PRED-TMBB
|
BOMP
|
SignalP 3.0
|
PrediSI
|
Signal-CF
|
Kyte Doolittle
|
|---|
|
Group 1 (6/6)
|
|
BB0418 (DipA)
|
+
|
+
|
+
|
+
|
+
|
+
|
+
|
+
|
+
|
+
|
|
BB0794
|
+
|
+
|
+
|
+
|
+
|
+
|
-
|
+
|
+
|
+
|
|
BB0795 (BamA)
|
+
|
+
|
+
|
+
|
+
|
+
|
-
|
+
|
+
|
+
|
|
BB0838
|
+
|
+
|
+
|
+
|
+
|
+
|
+
|
+
|
+
|
+
|
|
Group 2 (5/6)
|
|
BB0110
|
+
|
+
|
+
|
+
|
+
|
-
|
-
|
-
|
-
|
+
|
|
BB0236
|
+
|
+
|
-
|
+
|
+
|
+
|
-
|
+
|
-
|
+
|
|
BB0603 (P66)
|
+
|
+
|
+
|
+
|
+
|
-
|
+
|
+
|
+
|
+
|
|
BB0667
|
+
|
+
|
-
|
+
|
+
|
+
|
-
|
+
|
-
|
+
|
|
BB0811
|
+
|
+
|
-
|
+
|
+
|
+
|
+
|
+
|
+
|
+
|
|
BB0824
|
+
|
-
|
+
|
+
|
+
|
+
|
-
|
+
|
+
|
+
|
|
Group 3 (4/6)
|
|
BB0027
|
+
|
-
|
+
|
+
|
+
|
-
|
-
|
-
|
+
|
+
|
|
BB0089
|
+
|
+
|
-
|
+
|
-
|
+
|
+
|
+
|
+
|
+
|
|
BB0142 (BesC)
|
+
|
-
|
+
|
+
|
+
|
-
|
-
|
-
|
-
|
+
|
|
BB0156
|
+
|
+
|
-
|
+
|
+
|
-
|
-
|
-
|
+
|
+
|
|
BB0159
|
+
|
+
|
-
|
+
|
+
|
-
|
+
|
-
|
-
|
+
|
|
BB0161
|
+
|
+
|
+
|
-
|
-
|
+
|
-
|
-
|
-
|
+
|
|
BB0308
|
+
|
+
|
-
|
+
|
-
|
+
|
-
|
+
|
+
|
+
|
|
BB0319
|
+
|
+
|
-
|
+
|
-
|
+
|
-
|
-
|
-
|
+
|
|
BB0464
|
+
|
+
|
-
|
+
|
-
|
+
|
+
|
+
|
+
|
+
|
|
BB0465
|
+
|
+
|
+
|
-
|
+
|
-
|
-
|
+
|
+
|
+
|
|
BB0543
|
-
|
+
|
+
|
+
|
+
|
-
|
-
|
+
|
+
|
+
|
|
BB0564
|
-
|
+
|
+
|
+
|
+
|
-
|
-
|
-
|
-
|
+
|
|
BB0624
|
+
|
+
|
-
|
+
|
+
|
-
|
-
|
-
|
-
|
+
|
|
BB0662
|
+
|
+
|
-
|
+
|
+
|
-
|
-
|
+
|
-
|
+
|
|
BB0743
|
+
|
+
|
-
|
+
|
-
|
+
|
-
|
+
|
-
|
+
|
|
BB0761
|
+
|
+
|
-
|
+
|
-
|
+
|
-
|
-
|
-
|
+
|
|
Group 4 (3/6)
|
|
BB0032
|
+
|
+
|
-
|
+
|
-
|
-
|
-
|
-
|
+
|
+
|
|
BB0039
|
+
|
-
|
-
|
+
|
-
|
+
|
-
|
+
|
+
|
+
|
|
BB0043
|
+
|
-
|
-
|
+
|
+
|
-
|
-
|
-
|
+
|
+
|
|
BB0058
|
+
|
-
|
-
|
+
|
-
|
+
|
+
|
+
|
+
|
+
|
|
BB0102
|
+
|
+
|
-
|
+
|
-
|
-
|
+
|
+
|
-
|
-
|
|
BB0125
|
+
|
+
|
-
|
+
|
-
|
-
|
-
|
-
|
+
|
-
|
|
BB0165
|
+
|
+
|
-
|
+
|
-
|
-
|
-
|
-
|
-
|
+
|
|
BB0322
|
+
|
+
|
+
|
-
|
+
|
-
|
-
|
-
|
-
|
+
|
|
BB0352
|
+
|
+
|
-
|
+
|
-
|
-
|
+
|
+
|
-
|
+
|
|
BB0405
|
-
|
+
|
+
|
-
|
+
|
-
|
-
|
+
|
+
|
+
|
|
BB0406
|
+
|
+
|
+
|
-
|
-
|
-
|
+
|
+
|
-
|
+
|
|
BB0458
|
+
|
+
|
-
|
+
|
-
|
-
|
-
|
+
|
-
|
+
|
|
BB0546
|
+
|
+
|
-
|
+
|
-
|
-
|
-
|
-
|
+
|
+
|
|
BB0735
|
+
|
+
|
-
|
+
|
-
|
-
|
-
|
+
|
+
|
+
|
|
BB0790
|
+
|
-
|
-
|
+
|
-
|
+
|
-
|
-
|
+
|
+
|
-
aProteins are grouped according to the number of OM prediction programs that predict localization to the OM or β-barrel formation. The outer membrane protein prediction programs included CELLO, PSORTb, HHOMP, TMBETADISC-ACC, PRED-TMBB and BOMP
-
bSignal sequences were predicted by the programs SignalP 3.0, PrediSi, and Signal-CF. Signal sequences were also manually inspected by hydrophilicity plots generated according to the methods of Kyte and Doolittle
