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Table 1 Wild type S. flexneri strains used in this study

From: Shigella flexneri serotype 1c derived from serotype 1a by acquisition of gtrIC gene cluster via a bacteriophage

Strains Derivation/other names Reference Description
SFL1416 NCTC #3 NCTC Serotype 1a strain from NCTC (The National Collection of Type Cultures) London, UK
SFL1417 NCTC #5 NCTC Serotype 1b strain from NCTC (The National Collection of Type Cultures) London, UK
Bangladesh    
SFL1492 K-480 [19] Serotype 1b strain isolated in Bangladesh
SFL1493 K-647 [19] Serotype 1a strain isolated in Bangladesh
SFL1496 K-218 [19] Serotype 1b strain isolated in Bangladesh
SFL1499 K-143 [19] Serotype 1b strain isolated in Bangladesh
SFL1501 K-265 [19] Serotype 1c strain isolated in Bangladesh
SFL1504 K-212 [19] Serotype 1c strain isolated in Bangladesh
SFL1613 Y394 [4] Serotype 1c strain isolated in Bangladesh
Egypt    
SFL1683 ALX1592 [20] Serotype 1c strain isolated in Egypt
SFL1684 ALX1592 [20] Serotype 1c strain isolated in Egypt
SFL1685 ALX1869 [20] Serotype 1c strain isolated in Egypt
SFL1686 ALX1929 [20] Serotype 1c strain isolated in Egypt
SFL1687 ALX1930 [20] Serotype 1c strain isolated in Egypt
SFL1688 ALX1938 [20] Serotype 1c strain isolated in Egypt
SFL1689 ALX2463 [20] Serotype 1c strain isolated in Egypt
SFL1690 ALX2539 [20] Serotype 1c strain isolated in Egypt
SFL1691 ALX3216 [20] Serotype 1c strain isolated in Egypt
SFL1692 ALX3326 [20] Serotype 1c strain isolated in Egypt
Japan    
SFL1276 850325-1331 C. Sasakawa Serotype 1b strain isolated in Japan
SFL1287 1649-17 C. Sasakawa Serotype 1b strain isolated in Japan
SFL1288 1649-18 C. Sasakawa Serotype 1a strain isolated in Japan
SFL1300 1649-30 C. Sasakawa Serotype 1b strain isolated in Japan
Vietnam    
SFL1564 737 [21] Serotype 1c (rough) strain isolated in Vietnam (Son Tay Province)
SFL1568 774 [21] Serotype 1c (rough) strain isolated in Vietnam (Son Tay Province)
SFL1569 784 [21] Serotype 1c strain isolated in Vietnam (Son Tay Province)
SFL1570 786 [21] Serotype 1c (rough) strain isolated in Vietnam (Son Tay Province)
SFL1571 790 [21] Serotype 1c strain isolated in Vietnam (Son Tay Province)
SFL1575 1216 [21] Serotype 1c strain isolated in Vietnam (Son Tay Province)
SFL1576 1217 [21] Serotype 1c (rough) strain isolated in Vietnam (Son Tay Province)
SFL1577 1233 [21] Serotype 1c (rough) strain isolated in Vietnam (Son Tay Province)
SFL1578 1240 [21] Serotype 1c strain isolated in Vietnam (Son Tay Province)
SFL1579 1244 [21] Serotype 1c strain isolated in Vietnam (Son Tay Province)
SFL1580 1245 [21] Serotype 1c strain isolated in Vietnam (Son Tay Province)
SFL1581 1247 [21] Serotype 1c strain isolated in Vietnam (Son Tay Province)
SFL1582 1248 [21] Serotype 1c strain isolated in Vietnam (Son Tay Province)
SFL1583 1249 [21] Serotype 1c (rough) strain isolated in Vietnam (Son Tay Province)
SFL1584 1250 [21] Serotype 1c (rough) strain isolated in Vietnam (Son Tay Province)
SFL1585 1251 [21] Serotype 1c strain isolated in Vietnam (Son Tay Province)
SFL1586 1274 [21] Serotype 1c strain isolated in Vietnam (Son Tay Province)
SFL1587 1292 [21] Serotype 1c (rough) strain isolated in Vietnam (Son Tay Province)
SFL1588 1367 [21] Serotype 1c strain isolated in Vietnam (Son Tay Province)
SFL1589 1387 [21] Serotype 1c strain isolated in Vietnam (Son Tay Province)
SFL1590 1400 [21] Serotype 1c strain isolated in Vietnam (Son Tay Province)
SFL1594 1432 [21] Serotype 1c strain isolated in Vietnam (Son Tay Province)
SFL1595 1440 [21] Serotype 1c (rough) strain isolated in Vietnam (Son Tay Province)
SFL1596 1447 [21] Serotype 1c strain isolated in Vietnam (Son Tay Province)
SFL1597 1502 [21] Serotype 1c strain isolated in Vietnam (Son Tay Province)
SFL1598 1587 [21] Serotype 1c strain isolated in Vietnam (Son Tay Province)
SFL1600 1607 [21] Serotype 1c strain isolated in Vietnam (Son Tay Province)
SFL1602 1670 [21] Serotype 1c strain isolated in Vietnam (Son Tay Province)
SFL1603 1702 [21] Serotype 1c strain isolated in Vietnam (Son Tay Province)
SFL1604 1711 [21] Serotype 1c (rough) strain isolated in Vietnam (Son Tay Province)
SFL1605 1733 [21] Serotype 1c strain isolated in Vietnam (Son Tay Province)
SFL1606 1804 [21] Serotype 1c strain isolated in Vietnam (Son Tay Province)
SFL1607 1921 [21] Serotype 1c strain isolated in Vietnam (Son Tay Province)
SFL1610 2238 [21] Serotype 1c strain isolated in Vietnam (Son Tay Province)
SFL1556 NB1 [22] Serotype 1c strain isolated in Vietnam (Nha Trang province)
SFL1557 NB2 [22] Serotype 1c strain isolated in Vietnam (Nha Trang province)
SFL1558 NB7 [22] Serotype 1c strain isolated in Vietnam (Nha Trang province)
SFL1561 NB545 [22] Serotype 1c strain isolated in Vietnam (Nha Trang province)
SFL1562 NB644 [22] Serotype 1c strain isolated in Vietnam (Nha Trang province)
SFL1565 747 [22] Serotype 1c strain isolated in Vietnam (Nha Trang province)
SFL1566 749 [22] Serotype 1c strain isolated in Vietnam (Nha Trang province)
SFL1567 752 [22] Serotype 1c strain isolated in Vietnam (Nha Trang province)
SFL1572 1097 [22] Serotype 1c strain isolated in Vietnam (Nha Trang province)
SFL1573 1127 [22] Serotype 1c strain isolated in Vietnam (Nha Trang province)
SFL1599 1588 [22] Serotype 1c strain isolated in Vietnam (Nha Trang province)
SFL1712 481NT2 [22] Serotype 1c strain isolated in Vietnam (Nha Trang province)