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Table 1 Wild type S. flexneri strains used in this study

From: Shigella flexneri serotype 1c derived from serotype 1a by acquisition of gtrIC gene cluster via a bacteriophage

Strains

Derivation/other names

Reference

Description

SFL1416

NCTC #3

NCTC

Serotype 1a strain from NCTC (The National Collection of Type Cultures) London, UK

SFL1417

NCTC #5

NCTC

Serotype 1b strain from NCTC (The National Collection of Type Cultures) London, UK

Bangladesh

   

SFL1492

K-480

[19]

Serotype 1b strain isolated in Bangladesh

SFL1493

K-647

[19]

Serotype 1a strain isolated in Bangladesh

SFL1496

K-218

[19]

Serotype 1b strain isolated in Bangladesh

SFL1499

K-143

[19]

Serotype 1b strain isolated in Bangladesh

SFL1501

K-265

[19]

Serotype 1c strain isolated in Bangladesh

SFL1504

K-212

[19]

Serotype 1c strain isolated in Bangladesh

SFL1613

Y394

[4]

Serotype 1c strain isolated in Bangladesh

Egypt

   

SFL1683

ALX1592

[20]

Serotype 1c strain isolated in Egypt

SFL1684

ALX1592

[20]

Serotype 1c strain isolated in Egypt

SFL1685

ALX1869

[20]

Serotype 1c strain isolated in Egypt

SFL1686

ALX1929

[20]

Serotype 1c strain isolated in Egypt

SFL1687

ALX1930

[20]

Serotype 1c strain isolated in Egypt

SFL1688

ALX1938

[20]

Serotype 1c strain isolated in Egypt

SFL1689

ALX2463

[20]

Serotype 1c strain isolated in Egypt

SFL1690

ALX2539

[20]

Serotype 1c strain isolated in Egypt

SFL1691

ALX3216

[20]

Serotype 1c strain isolated in Egypt

SFL1692

ALX3326

[20]

Serotype 1c strain isolated in Egypt

Japan

   

SFL1276

850325-1331

C. Sasakawa

Serotype 1b strain isolated in Japan

SFL1287

1649-17

C. Sasakawa

Serotype 1b strain isolated in Japan

SFL1288

1649-18

C. Sasakawa

Serotype 1a strain isolated in Japan

SFL1300

1649-30

C. Sasakawa

Serotype 1b strain isolated in Japan

Vietnam

   

SFL1564

737

[21]

Serotype 1c (rough) strain isolated in Vietnam (Son Tay Province)

SFL1568

774

[21]

Serotype 1c (rough) strain isolated in Vietnam (Son Tay Province)

SFL1569

784

[21]

Serotype 1c strain isolated in Vietnam (Son Tay Province)

SFL1570

786

[21]

Serotype 1c (rough) strain isolated in Vietnam (Son Tay Province)

SFL1571

790

[21]

Serotype 1c strain isolated in Vietnam (Son Tay Province)

SFL1575

1216

[21]

Serotype 1c strain isolated in Vietnam (Son Tay Province)

SFL1576

1217

[21]

Serotype 1c (rough) strain isolated in Vietnam (Son Tay Province)

SFL1577

1233

[21]

Serotype 1c (rough) strain isolated in Vietnam (Son Tay Province)

SFL1578

1240

[21]

Serotype 1c strain isolated in Vietnam (Son Tay Province)

SFL1579

1244

[21]

Serotype 1c strain isolated in Vietnam (Son Tay Province)

SFL1580

1245

[21]

Serotype 1c strain isolated in Vietnam (Son Tay Province)

SFL1581

1247

[21]

Serotype 1c strain isolated in Vietnam (Son Tay Province)

SFL1582

1248

[21]

Serotype 1c strain isolated in Vietnam (Son Tay Province)

SFL1583

1249

[21]

Serotype 1c (rough) strain isolated in Vietnam (Son Tay Province)

SFL1584

1250

[21]

Serotype 1c (rough) strain isolated in Vietnam (Son Tay Province)

SFL1585

1251

[21]

Serotype 1c strain isolated in Vietnam (Son Tay Province)

SFL1586

1274

[21]

Serotype 1c strain isolated in Vietnam (Son Tay Province)

SFL1587

1292

[21]

Serotype 1c (rough) strain isolated in Vietnam (Son Tay Province)

SFL1588

1367

[21]

Serotype 1c strain isolated in Vietnam (Son Tay Province)

SFL1589

1387

[21]

Serotype 1c strain isolated in Vietnam (Son Tay Province)

SFL1590

1400

[21]

Serotype 1c strain isolated in Vietnam (Son Tay Province)

SFL1594

1432

[21]

Serotype 1c strain isolated in Vietnam (Son Tay Province)

SFL1595

1440

[21]

Serotype 1c (rough) strain isolated in Vietnam (Son Tay Province)

SFL1596

1447

[21]

Serotype 1c strain isolated in Vietnam (Son Tay Province)

SFL1597

1502

[21]

Serotype 1c strain isolated in Vietnam (Son Tay Province)

SFL1598

1587

[21]

Serotype 1c strain isolated in Vietnam (Son Tay Province)

SFL1600

1607

[21]

Serotype 1c strain isolated in Vietnam (Son Tay Province)

SFL1602

1670

[21]

Serotype 1c strain isolated in Vietnam (Son Tay Province)

SFL1603

1702

[21]

Serotype 1c strain isolated in Vietnam (Son Tay Province)

SFL1604

1711

[21]

Serotype 1c (rough) strain isolated in Vietnam (Son Tay Province)

SFL1605

1733

[21]

Serotype 1c strain isolated in Vietnam (Son Tay Province)

SFL1606

1804

[21]

Serotype 1c strain isolated in Vietnam (Son Tay Province)

SFL1607

1921

[21]

Serotype 1c strain isolated in Vietnam (Son Tay Province)

SFL1610

2238

[21]

Serotype 1c strain isolated in Vietnam (Son Tay Province)

SFL1556

NB1

[22]

Serotype 1c strain isolated in Vietnam (Nha Trang province)

SFL1557

NB2

[22]

Serotype 1c strain isolated in Vietnam (Nha Trang province)

SFL1558

NB7

[22]

Serotype 1c strain isolated in Vietnam (Nha Trang province)

SFL1561

NB545

[22]

Serotype 1c strain isolated in Vietnam (Nha Trang province)

SFL1562

NB644

[22]

Serotype 1c strain isolated in Vietnam (Nha Trang province)

SFL1565

747

[22]

Serotype 1c strain isolated in Vietnam (Nha Trang province)

SFL1566

749

[22]

Serotype 1c strain isolated in Vietnam (Nha Trang province)

SFL1567

752

[22]

Serotype 1c strain isolated in Vietnam (Nha Trang province)

SFL1572

1097

[22]

Serotype 1c strain isolated in Vietnam (Nha Trang province)

SFL1573

1127

[22]

Serotype 1c strain isolated in Vietnam (Nha Trang province)

SFL1599

1588

[22]

Serotype 1c strain isolated in Vietnam (Nha Trang province)

SFL1712

481NT2

[22]

Serotype 1c strain isolated in Vietnam (Nha Trang province)