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Table 4 The genetic variants found within sub-assemblages of G. duodenalis assemblage A and B at the bg gene

From: Multilocus genotyping of Giardia duodenalis isolates from children in Oromia Special Zone, central Ethiopia

sub-assemblages

GenBank accession no

No. of isolates

Nucleotide at position*

165

183

309

324

415

423

519

Ass-A

         

 A3 Ref.

AY072724

 

T

A

G

A

T

C

A

 AII

KT948085

8

*

*

*

*

*

*

*

 A

KT948085

2

*

*

*

*

C

T

*

Ass-B

         

 B3 Ref.

AY072727

 

C

A

C

C

C

A

T

 B3 like1

KT948083

13

*

*

Y

*

*

*

*

 B3 like2

KT948084

9

*

*

*

*

*

*

*

 EB6

KT948086

3

*

X

T

*

*

*

Y

 B3 like3

KT948088

2

*

*

*

*

*

*

C

 B3 like4

KT948089

1

T

*

T

*

*

*

*

 EB7

KT948090

1

T

*

*

T

*

*

*

  1. Key: Asterisks (*) indicate nucleotide identity with the reference sequence; X: A/G and Y: C/T indicates overlapping nucleotides
  2. Nucleotide positions are numbered according to the reference (ref.) sub-assemblages with the first nucleotide as position 1