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Table 4 The genetic variants found within sub-assemblages of G. duodenalis assemblage A and B at the bg gene

From: Multilocus genotyping of Giardia duodenalis isolates from children in Oromia Special Zone, central Ethiopia

sub-assemblages GenBank accession no No. of isolates Nucleotide at position*
165 183 309 324 415 423 519
Ass-A          
 A3 Ref. AY072724   T A G A T C A
 AII KT948085 8 * * * * * * *
 A KT948085 2 * * * * C T *
Ass-B          
 B3 Ref. AY072727   C A C C C A T
 B3 like1 KT948083 13 * * Y * * * *
 B3 like2 KT948084 9 * * * * * * *
 EB6 KT948086 3 * X T * * * Y
 B3 like3 KT948088 2 * * * * * * C
 B3 like4 KT948089 1 T * T * * * *
 EB7 KT948090 1 T * * T * * *
  1. Key: Asterisks (*) indicate nucleotide identity with the reference sequence; X: A/G and Y: C/T indicates overlapping nucleotides
  2. Nucleotide positions are numbered according to the reference (ref.) sub-assemblages with the first nucleotide as position 1