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Table 3 The genetic variants found within sub-assemblages of G. duodenalis assemblage B at the tpi gene

From: Multilocus genotyping of Giardia duodenalis isolates from children in Oromia Special Zone, central Ethiopia

sub-assemblages GenBank accession no No. of isolates Nucleotide at position*
25 51 77 148 151 154 184 196 415 490
BIV (Ref.) AF069560   A A T G T T C A A C
B2 KT948101 16 G * C * C C * G G *
B KT948103 7 G * C A C C * G G *
MB9 KT948104 3 * * * * * C   G G *
WB8 KT948109 1 * * * * * * * * G *
EB1 KT948105 3 G * C * * * * G G *
EB2 KT948106 2 G * C * C C T G G *
EB3. KT948107 2 * * * * * C * G G *
EB4 KT948108 1 * G C * C C * G G T
EB5 KT948110 1 * * Y * * * * * * *
  1. Key: Asterisks (*) indicate nucleotide identity with the reference sequence; Y: C/T indicates overlapping nucleotides
  2. Nucleotide positions are numbered according to the reference (ref.) sub-assemblage BIV partial sequence (GenBank accession number AF069560), with the first nucleotide as position 20