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Table 1 Genes involved in the acyclic terpene utilization (Atu) and leucin isovalerate utilization (Liu) pathway

From: The anaerobic linalool metabolism in Thauera linaloolentis 47 Lol

Enzyme NCBI accession Length [AA] AA similarity [%] E-value Protein identification by MS
Linalool isomerasea ENO87364 644 20 3E-10 Yes
Geraniol dehydrogenasea (GeoA) ENO84122 366 46 7E-96 Yes
Geranial dehydrogenasea (GeoB) ENO84123 456 31 7E-39 No
Acyl-CoA synthaseb (AtuH) ENO87356 545 24 1E-15 No
Geranyl-CoA carboxylaseb beta-subunit (AtuC) ENO87361 545 54 0 Yes
Geranyl-CoA carboxylaseb alpha subunit (AtuF) ENO87362 705 52 0 Yes
Isohexenyl-glutaconyl-CoA hydrataseb (AtuE) ENO87363 258 30 7E-27 No
3-Hydroxy-3-isohexenylglutaryl-CoA:acetate lyaseb (AtuA) ENO84124 615 52 0 Yes
3-Methylcrotonyl-CoA carboxylaseb beta-subunit (LiuB) ENO88226 535 72 0 Yes
3-Methylcrotonyl-CoA carboxylaseb alpha subunit (LiuD) ENO88223 668 53 0 Yes
3-Methylglutaconyl-CoA hydrataseb (LiuC) ENO88225 265 44 3E-73 No
Hydroxymethylglutaryl-CoA lyaseb (LiuE) ENO88221 312 63 2E-129 No
  1. Genes were identified by amino acids alignments using C. defragrans 65Phena and P. aeruginosa PAO1b sequences as references. Proteins identified in the proteomic approach were analyzed by SDS-PAGE coupled to MALDI-ToF MS (Additional file 2: Figure S1)