Table 2 The number of conserved core genomic regions present in 19 selected bacterial genomes, from the total 3598 conserved core genomic regions found in at least 70Â % of the 2324 E. coli genomes examined
From: SuperPhy: predictive genomics for the bacterial pathogen Escherichia coli
Genome | No. ‘conserved core’ genes |
|---|---|
E. coli O103:H2,12009 | 3563 |
E. coli O157:H7, EDL933 | 3557 |
E. coli K-12, MG1655 | 3550 |
E. coli, UMN026 | 3483 |
E. coli O7:K1, CE10 | 3448 |
E. coli O83:H1, NRG 857C | 3289 |
Shigella sonnei, 53G | 3259 |
Shigella flexneri 2002017 | 3148 |
Shigella boydii, CDC 3083-94 | 2965 |
Shigella dysenteriae, 1617 | 2683 |
Escherichia fergusonii ATCC 35469 | 1619 |
Salmonella enterica subsp. Enterica serovar Typhimurium str. 14028S | 95 |
Citrobacter rodentium, ICC168 | 77 |
Klebsiella oxytoca, E718 | 50 |
Klebsiella pneumoniae subsp. Pneumoniae, 1084 | 50 |
Klebsiella variicola, At-22 | 46 |
Escherichia blattae, DSM 4481 | 27 |
Staphylococcus aureus, 04-02981 | 0 |
Listeria monocytogenes, 07PF0776 | 0 |