Fig. 6
From: SuperPhy: predictive genomics for the bacterial pathogen Escherichia coli
Group analyses identifying O157:H7 predictive SNPs. A screen capture demonstrating the ‘Group Analyses’ functionality of SuperPhy. In this example, all genomes of serotype O157:H7 are compared to all other genomes, and SNPs in the shared regions are ranked by p-value, from most statistically predictive of the group to least, with false discovery rate multiple testing correction. The results table is interactive and the complete dataset can be downloaded as a .csv file for offline analyses