Table 2 Overview of sequences obtained from individual P. rubescens filaments during this study

mcyTD

Crossover junction endodeoxyribonuclease RusA and putative Holliday junction resolvase

1194

KP315862 (H22 ^b); KP315863 (A11 ^b); KP315864 (H11 ^b, H31, W22 ^b, Z14 ^b, Z24 ^b,e, Z51^b, Z72 ^b);

rbcLX

ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, and ribulose-1,5-bisphosphate carboxylase/oxygenase (rbcX) gene

383-390

KP315874 (Z75, M78 ^b, W22 ^b, A10^b); KP315875 (M41^c) ;KP315876 (H39); KP315877 (A20^b); KP315878 (M27, H81 ^b, H96, W36 ^d,e, Z66 ^c,f); KP315879 (A24); KP315880 (M2, M7^e, M19^c, M21^e, M40, M49^c, M52, M65 ^b, M80 ^b, M85^e, W3, W4, W13^e, W17, W29, W35^b, W39 ^e, W53, W82 ^e, Z4, Z5^e, Z7^b, Z14 ^b, Z18, Z24 ^b,e, Z52, Z59^e, Z96, H19, H20, H31^b, H32, H49^e, H84, H95^e, A11^b, A13, A18^e, A30^b, A32, A45, W11 ^g, W18^b,g, W23 ^b,f, W34 ^b,f, W40 ^c, W47 ^c,f,g, W63^b,g, W81 ^c, W87^c, W93 ^c);

cpcBA

partial cpcB gene for phycocyanin beta subunit and partial cpcA gene for phycocyanin alpha subunit

470

KP315865 (M2, M52, Z4, Z18, H96, H49^e, A32); KP315866 (M21^e); KP315867 (W29); KP315868 (W18^b,g); KP315869 (W4); KP315870 (M27, M40, M85^e, W3, W53, Z52, Z96, H19, H20, H32, H39, A13, A24, A45, M7^e, W39 ^e, W13^e, W82 ^e, Z5^e, Z7^b, Z14 ^b, Z24 ^b,e, Z59^e, H31^b, H81 ^b, H94 ^b, H95^e, A10 ^b, A11^b, A18^e, A30^b, M19^c, M41^c, M49^c, W11 ^g, W40 ^c, W81 ^c, W87^c, W93 ^c, Z66 ^c,f, H84); KP315871 (A34); KP315872 (M65 ^b, M78 ^b, W35^b, W23 ^b,f, W63^b,g); KP315873 (M74^c);

mcyD

partially deleted mcyD gene of the MC synthetase

1964

KP710231 (M14^c, M19^c, M41^c, M74^c, W40 ^c, W47 ^c,f,g, W49 ^e, W81 ^c, W87^c, W93 ^c, Z66 ^c,f)

mcyA

partial mcyA gene of MC synthetase, short mcyAA1 variant, 5′end + 3′end of recombination site

447, 428

KP315861 (A16, A33, H9, H59, MNewSp6 ^b, MNewSp92, W29, W98 ^e, Z21 ^b, Z94)