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Table 2 DNA binding affinities (nM) determined for HpMutS2 and mutants

From: Mutations in the nucleotide binding and hydrolysis domains of Helicobacter pylori MutS2 lead to altered biochemical activities and inactivation of its in vivo function

 

No nucleotide

+ ATP

+ ADP

+ ATPγS

Single-stranded DNA

 HpMutS2

21.48 ± 2.28

a

17.27 ± 2.89

11.44 ± 0.19

 HpMutS2-G338R

32.37 ± 3.32

30.70 ± 3.43

23.89 ± 2.91

ND

 HpMutS2-E413A

73.77 ± 75.74

a

a

ND

Holliday junction

 HpMutS2

14.38 ± 0.82

20.77 ± 2.95

22.63 ± 1.391

22.46 ± 1.23

 HpMutS2-G338R

21.41 ± 0.93

32.04 ± 4.34

34.02 ± 5.31

ND

 HpMutS2-E413A

30.80 ± 1.97

31.72 ± 3.34

46.38 ± 5.60

ND

  1. Dissociation constants were estimated from analysis of Figs. 5b-g. The error values represent standard deviation from at least two different experiments. ND not determined; a, could not be determined