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Table 3 Characteristics and taxonomical classification of selected microbial bins

From: Metagenome from a Spirulina digesting biogas reactor: analysis via binning of contigs and classification of short reads

Bin characteristics

16S rDNA taxonomical classification

Bin

Contigs (#)

Size (Mb)

N50 contig length (Kb)

GC (%)

Cov (X)

tRNA (#)

Conserved genes (#)

Abun (%)

A

443

1.87

9.8

32.0

66.8

21

113/139

14.9

Un. Tissierella

B

489

2.58

17.2

29.8

42.4

19

105/139

13.1

Un. Clostridiales

C

443

2.40

13.0

31.9

36.6

21

79/139

10.5

Un. Clostridiales

D

468

3.37

22.5

42.0

22.3

77

103/139

9.0

Proteiniphilum

E

384

1.91

16.2

47.3

33.3

49

92/139

7.6

Un. Anaerolineaceae

F

397

2.44

27.7

31.1

23.4

49

106/139

6.9

Un. Thermotogaceae

G

225

2.53

39.5

51.6

21.8

71

164/139

6.5

Unknown

H

879

3.05

7.9

37.8

11.5

44

82/139

4.2

Un. Bacteroidetes

I

4267

4.10

1.6

49.2

7.1

70

75/139

3.5

Unknown

J

8444

5.11

0.7

55.5

5.6

31

161/139

3.5

Un. Methanomicrobia

  1. Cov Coverage
  2. Abun Abundance
  3. Un Uncultured
  4. Characteristics and 16S rDNA taxonomical classification of the 10 selected bins obtained from the Spirulina metagenome