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Table 2 Sequencing statistics

From: Metagenome from a Spirulina digesting biogas reactor: analysis via binning of contigs and classification of short reads

  Bases Reads Mean read length GC %
Sequencing data
PGM raw data 1 GB 5630598 155 (bp) 38
Post trimmomatic data 974 MB 5240830 185 (bp) 38
Assembled contigs
Assemblies # Submitted reads Minimum read length # Contigs # Contigs >500 bp N50 contig size Mean contig size Largest contig size
Assembly Aa 5240830 50 (bp) 54246 21998 3810 (bp) 1807 (bp) 171327 (bp)
Assembly Ba 5240830 50 (bp) 278958 30987 1226 (bp) 1115 (bp) 18073 (bp)
Assembly Ca 1984110 220 (bp) 27994 14915 4380 (bp) 1899 (bp) 75139 (bp)
  1. Dataset-1 sequencing data and assemblies statistics
  2. aSee Material & Methods for details about assembly settings