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Table 3 Summary of tyrosine decarboxylase BLAST analysis

From: High-throughput DNA sequencing to survey bacterial histidine and tyrosine decarboxylases in raw milk cheeses

Cheese # of Clones Gene target BLAST output E-value % Identity
Irish Artisanal Cheese A 5 tdc E. faecalis tdc operon complete cds 0 99 %
  1 tdc E. faecalis tdc operon complete cds 1.0E-141 99 %
  2 tdc Lb. curvatus tdc complete cds/S. thermophilus tdcA gene 0 99 %
Reblochon 5 tdc Lb. curvatus tdc /S. thermophilus tdcA gene complete cds 0 99 %
  1 tdc E. faecalis tdc gene, complete cds 0 100 %
Irish Artisanal Cheese B 8 tdc Lb. curvatus tdc, complete cds/S. thermophilus tdcA gene 0 99 %
Tête de Moine 7 tdc E. faecalis tdc gene, complete cds 0 98 %
  1 tdc Lb. plantarum/Lb. brevis tdc gene cds 0 99 %
Pecorino Sardo 6 tdc E. faecium tyrS gene, tyrdc gene complete cds 0 99 %
  1 tdc E. faecium tyrS gene, tyrdc gene complete cds 2E-70 79 %
  1 tdc E. faecium tyrS gene, tyrdc gene complete cds 0 89 %
Ossau-Iraty 2 tdc E. faecalis, tdc gene complete cds 0 98 %
  2 tdc E. faecalis complete genome 0 97 %
  1 tdc E. faecalis complete genome 0 99 %
  1 tdc Lb. curvatus tdc gene complete cds/S. thermophilus tdcA gene 0 99 %
  1. Summary of homologues of tyrosine decarboxylase (tdc) gene fragments detected in tdc positive cheeses using Sanger sequencing of cloned amplicons