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Table 3 Summary of Vibrio fischeri ETJB1H biofilm proteins identified by UPLC/MS

From: Proteomic and metabolomic profiles demonstrate variation among free-living and symbiotic vibrio fischeri biofilms

Referencea Protein identified Theoretical MW(KDa)/IPb No. peptides matched Coverage (%)
GI:59711008 UDP-N acetylglucosomine 1 carboxyvinyltransferase 44.72/5.28 20 60
GI:59479183 Outer membrane protein U porin OmpU 33.18/3.92 12 55
GI:59712357 Cob(I)yrinic acid a,c-diamide adenosyltransferase 28.31/4.08 10 53
GI:59710825 ABC transporter ATP-binding protein 72.70/4.50 22 48
GI:197317623 carbon starvation protein A 53.51/5.14 13 44
GI:59712372 ATP-dependent Clp protease ATP-binding subunit 82.58/4.8 31 40
GI:31414756 sigma 54 transcriptional activator 53.89/5.15 12 37
GI:59482580 multidrug efflux system protein 122.42/4.87 34 37
GI:59480318 phosphate-binding protein 29.45/5.00 8 36
GI:59710693 Oxidoreductase 43.69/5.25 10 36
GI:121308572 Bioluminescence regulatory protein 84.37/4.20 24 35
GI:172087731 Flagellin 48.09/4.05 9 35
GI:59711558 putative Holiday junction DNA helicase RuvA 29.78/4.71 9 35
GI:148536406 RecA protein 28.54/4.32 8 35
GI:59480175 chaperone, DnaK-like protein 69.88/4.52 10 35
  1. aNCBI reference sequence
  2. bCalculated using AnTheProt (http://antheprot-pbil.ibcp.fr/) and Scansite3 (http://scansite3.mit.edu/#home)