Proteomic and metabolomic profiles demonstrate variation among free-living and symbiotic vibrio fischeri biofilms

Table 3 Summary of Vibrio fischeri ETJB1H biofilm proteins identified by UPLC/MS

Reference^a	Protein identified	Theoretical MW(KDa)/IP^b	No. peptides matched	Coverage (%)
GI:59711008	UDP-N acetylglucosomine 1 carboxyvinyltransferase	44.72/5.28	20	60
GI:59479183	Outer membrane protein U porin OmpU	33.18/3.92	12	55
GI:59712357	Cob(I)yrinic acid a,c-diamide adenosyltransferase	28.31/4.08	10	53
GI:59710825	ABC transporter ATP-binding protein	72.70/4.50	22	48
GI:197317623	carbon starvation protein A	53.51/5.14	13	44
GI:59712372	ATP-dependent Clp protease ATP-binding subunit	82.58/4.8	31	40
GI:31414756	sigma 54 transcriptional activator	53.89/5.15	12	37
GI:59482580	multidrug efflux system protein	122.42/4.87	34	37
GI:59480318	phosphate-binding protein	29.45/5.00	8	36
GI:59710693	Oxidoreductase	43.69/5.25	10	36
GI:121308572	Bioluminescence regulatory protein	84.37/4.20	24	35
GI:172087731	Flagellin	48.09/4.05	9	35
GI:59711558	putative Holiday junction DNA helicase RuvA	29.78/4.71	9	35
GI:148536406	RecA protein	28.54/4.32	8	35
GI:59480175	chaperone, DnaK-like protein	69.88/4.52	10	35

^aNCBI reference sequence
^bCalculated using AnTheProt (http://antheprot-pbil.ibcp.fr/) and Scansite3 (http://scansite3.mit.edu/#home)

ISSN: 1471-2180