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Table 4 Differentially expressed genes related to the development and conidial formation of A. flavus

From: Deep sequencing analysis of transcriptomes in Aspergillus flavus in response to resveratrol

Gene ID

Gene Name

RPKM

Log2(AM-Res/AM)

q value

DEGs

Annotated gene function

AM

AM-Res

CADAFLAG00011929

AFLA_101920

4.6010

1.5649

−1.5559

1.249E-88

Yes

Extracellular developmental signal biosynthesis protein FluG

CADAFLAG00007028

AFLA_131490

76.2979

53.7967

−0.5041

  

Hypothetical protein

CADAFLAG00007282

AFLA_134030

7.7607

3.5087

−1.1452

  

Developmental regulator FlbA development.

CADAFLAG00007610

AFLA_137320

64.9838

16.8385

−1.9483

2.173E-07

Yes

C2H2 conidiation transcription factor FlbC

CADAFLAG00003623

AFLA_017380

67.9510

41.5711

−0.7089

  

Hypothetical protein

CADAFLAG00011576

AFLA_098380

0.4394

0.4080

−0.1068

  

Conidial hydrophobin RodA/RolA

CADAFLAG00003311

AFLA_014260

0.0000

0.2077

_

  

Conidial hydrophobin RodB/HypB

CADAFLAG00003719

AFLA_018340

74.9734

43.1293

−0.7977

  

G-protein complex alpha subunit GpaA/FadA

CADAFLAG00006026

AFLA_046990

173.0674

78.9994

−1.1314

1.435E-55

Yes

APSES transcription factor StuA (stunted)

CADAFLAG00007519

AFLA_136410

142.1301

101.1580

−0.4906

  

Transcriptional regulator Medusa(medusa)

CADAFLAG00001065

AFLA_082850

0.9080

0.4216

−1.1068

  

C2H2 type conidiation transcription factor BrlA

CADAFLAG00002337

AFLA_029620

1.5396

0.2376

−2.6962

  

Transcription factor AbaA

CADAFLAG00011194

AFLA_052030

11.7189

5.8671

−0.9981

  

Regulatory protein wetA

CADAFLAG00006026

AFLA_046990

173.0674

78.9994

−1.1314

  

Cell pattern formation-associated protein stuA

CADAFLAG00002704

AFLA_033290

27.7370

19.7674

−0.4887

7.824E-10

 

Regulator of secondary metabolism LaeA

CADAFLAG00008070

AFLA_066460

16.3529

13.0959

−0.3204

1.54E-32

 

Developmental regulator AflYf / VeA

CADAFLAG00000929

AFLA_081490

33.9585

43.1005

0.3439

  

Nucleoside diphosphatase Gda1/VelB

CADAFLAG00002131

AFLA_027560

22.5485

37.5174

1.2854

1.77E-07

Yes

Vacuolar protein sorting-associated protein 13

CADAFLAG00003658

AFLA_017730

24.5015

41.4414

1.3091

0.0002471

Yes

Regulator of V-ATPase in vacuolar membrane protein 1

CADAFLAG00005274

AFLA_039470

27.8848

75.9818

1.9970

1.34E-11

Yes

Vacuolar calcium ion transporter

CADAFLAG00006698

AFLA_060890

137.9586

260.6940

1.4690

5.93E-15

Yes

Vacuolar amino acid transporter 3

CADAFLAG00010071

AFLA_130130

166.9408

312.7826

1.4567

6.59E-09

Yes

Putative vacuolar protein sorting-associated protein TDA6

Novel00107

Novel00107

32.5194

66.4116

1.5810

0.0032328

Yes

Vacuolar protein sorting-associated protein 13

CADAFLAG00011638

AFLA_099000

317.3651

906.9007

2.0657

1.19E-49

Yes

Superoxide dismutase [Cu-Zn]

CADAFLAG00010511

AFLA_004450

5.3195

1.3098

−1.4711

6.84E-09

Yes

Nonribosomal peptide synthetase 12

  1. RPKM: Reads per kilobase per million reads; q value: corrected p value; DEGs: differently expressed genes; AM-Res (Treatment) and AM (Control): A. flavus was cultured in A&M medium with or without resveratrol, respectively; log2(fold_change) = log2(AM-Res/AM); log2(fold_change) > 0: the expression of a gene was up-regulated; log2(fold_change) < 0: the expression of a gene was down-regulated
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BMC Microbiology

ISSN: 1471-2180

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