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Table 1 Summary of the RNA-Seq gene expression analysis. Numbers of genes that had significant expression changes in Caco-2 cells

From: Bifidobacteria grown on human milk oligosaccharides downregulate the expression of inflammation-related genes in Caco-2 cells

Strain

Comparison

Expression changea

B. breve SC95

GLU vs HMO

12 genes upregulated and 61 genes downregulated by HMO

LAC vs HMO

196 genes upregulated and 144 genes downregulated by HMO

GLU vs LAC

96 genes upregulated and 426 genes downregulated by LAC

B. infantis ATCC 15697

GLU vs HMO

107 genes upregulated and 178 genes downregulated by HMO

LAC vs HMO

21 genes upregulated and 37 genes downregulated by HMO

 

GLU vs LAC

97 genes upregulated and 48 genes downregulated by LAC

  1. aGenes with statistically significant changes in expression