Table 5 Alleles of the Binary Toxin, corresponding probes, GenBank entries and typing data

cdtA ₆₃₀ +cdtB ₆₃₀

AM180355.1

ABHD02000025.1, ABKJ02000018.1, ADEJ01000391.1, AGAC01000133.1, AM180355.1, AY341253.1

probe-1023 + probe-1026

(probe-1038) + probe-1039

slpA _23m63, slpA ₇₉₆₈₅, slpA _DJNS0578, slpA _JND08162, slpA _JND09041, slpA _MRY060211, slpA _R12885, slpA _R13711, slpA ₆₃₀, slpA ₆₄₀₇, slpA _BI9, slpA _Kohn, slpA _R12884, slpA _R12884 trunc., slpA _R13541, slpA-negatives

RT-001, RT-002, RT-005, RT-009, RT-011, RT-012, RT-013, RT-014, RT-015, RT-029, RT-031, RT-045, RT-049, RT-054, RT-056, RT-057, RT-064, RT-070, RT-071, RT-072, RT-087, RT-094, RT-103, RT-137, RT-150, RT-159, RT-163

I

ST-03, ST-04, ST-08, ST-17, ST-42, ST-45, ST-46, ST-54, ST-55, ST-58

HP-01, HP-02, HP-03, HP-04, HP-05, HP-06, HP-07, HP-08, HP-09, HP-10, HP-12, HP-13, HP-14, HP-22, HP-23, HP-24

cdtA _R20291 + cdtB _R20291

FN545816.1

AAML04000014.1, ABFD02000010.1, ABHE02000029.1, ABHF02000033.1, ABHG02000020.1, ABKK02000028.1, AF271719.1, EF581852.1, FN538970.1, FN665654.1, FN668941.1, HQ639670.1, HQ639671.1, HQ639672.1, HQ639673.1, HQ639675.1, HQ639676.1, HQ639677.1, HQ639678.1, L76081.2

probe-1026 + probe-1027 + probe-1029

probe-1031 + probe-1038 + (probe-1039) + probe-1040

slpA _R20291

RT-027

II

ST-01

HP-31, HP-32

cdtA _{Clade III}+ cdtB _R20291

-

-

probe-1027 + probe-1029

(probe-1031) + probe-1038 + probe-1039 + (probe-1040)

slpA _R12884, slpA _R12884 trunc.,

RT-023

III

N/A

HP-33, HP-34

cdtA _R20291 + cdtB _M120

FN665653.1

ABKL02000028.1, ADDE01000043.1, ADNX01000028.1, ADVM01000026.1, HQ639674.1, HQ639679.1

probe-1026 + probe-1027 + probe-1029

probe-1030 + probe-1038 + (probe-1039) + probe-1041

slpA _23m63, slpA _R13540

RT-078

V

ST-11

HP-37, HP-38, HP-39

cdtA/B negative

-

-

-

-

slpA ₁₄₄₆, slpA _R13711, slpA ₆₄₀₇, slpA ₇₉₆₈₅, slpA _CF5, slpA _JND08037, slpA ₆₅₀₃, slpA ₆₅₀₃ trunc., slpA _J9952 trunc., slpA _Kohn, slpA _R13700, slpA-negatives

RT-010, RT-011, RT-012, RT-013, RT-015, RT-017, RT-029, RT-039, RT-046, RT-049, RT-056, RT-071, RT-081, RT-087, RT-094

I, IV, ”VI”

ST-09, ST-35, ST-37, ST-54, ST-58, ST-86, ST-127dlv

HP-04, HP-11, HP-15, HP-19, HP-21, HP-25, HP-26, HP-27, HP-28, HP-29, HP-30, HP-35, HP-36