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Table 6 Phenotypic and genotypic characterization of isolates by different length of amplicons

From: Variability in gene cassette patterns of class 1 and 2 integrons associated with multi drug resistance patterns in Staphylococcus aureus clinical isolates in Tehran-Iran

Strain

Source

Size of 5′CS-3′CS amplicons

Intl gene

Gene cassette array

Integron putative locationa

Resistance phenotype

Accession number

Sm59

wound

1200 bp

I

blaoxa2

C

CRO,LEV,TN,E,CD,LZD,RP,PG,OXA,A,S,ATH,GM,CIP,AP,SXT

KF356395

MMS1

wound

750 bp

I

aadB

C

CRO,E,CD,PG,A,S,ATHSPC,GM,CIP,AP,TE,C,AK

KF015994

s61

wound

750 bp

I

aadB

C

CRO,TN,E,CD,PG,OXA,A,S,SPC,GM,CIP,AP,TE,SXT

KF030468

sm54

blood

1200 bp

I

blaoxa2

C

CRO,LEV,TN,E,CD,LZD,RP,PG,OXA,A,S,ATH,GM,CIP,AP,SXT

KF305707

sa10

blood

800 bp

I

aacA4

C

CRO,LEV,E,CD,LZD,RP,PG,OXA,A,S,ATH,CIP,AP,TE,SXT

KF305706

S232

blood

500 bp

I

putative glucose dehydrogenase-hypothetical protein

C

CRO,E,CD,PG,OXA,A,S,SPC,AP,TE

KF411133

MMS2

abscess

750 bp

I

aadB

C

CRO,E,CD,PG,A,S,ATH,SPC,GM,CIP,AP,TE,C,AK

KF015995

s74

blood

1000 bp

I

aadA2

C

CRO,TN,E,CD,PG,OXA,A,S,SPC,GM,CIP,AP,TE,SXT

KF411134

s54

blood

2120 bp

I

orfD-aacA4-catBB

P

CRO,LEV,E,CD,LZD,PG,OXA,A,S,ATH,SPC,GM,CIP,AP,TE,C,AK

KF411135

s5

wound

1100 bp

I

orfD-aacA4

C

CRO,LEV,E,CD,LZD,PG,OXA,A,S,ATH,SPC,GM,CIP,AP,TE,C,AK

KF411137

s22

wound

1000 bp

I

aadA2

C

CRO,TN,E,CD,PG,OXA,A,S,SPC,GM,CIP,AP,TE,SXT,AK

KF411138

s36

blood

1000 bp

I

aadA2

C

CRO,TN,E,CD,PG,OXA,A,S,SPC,GM,CIP,AP,TE,SXT

KF411139

sm91

blood

1420 bp

I

aadB-catB3

C

CRO,TN,E,CD,PG,OXA,A,S,SPC,GM,APC,SXT

KJ002505

sm105

wound

3100 bp

I

aadB-aadA1-cmlA6

P

CRO,LEV,E,CD,LZD,PG,OXA,A,S,ATH,SPC,GM,CIP,AP,TE,C,SXT,AK

KJ002506

sm22

wound

750 bp

II

hdfrA11

C

CRO,LEV,TN,E,CD,PG,OXA,A,S,SPC,GM,CIP,AP,TE,SXT

KF305708

sm97

blood

2500 bp

II

dhfrA1-sat2-aadA1

P

CRO,LEV,TN,E,CD,PG,OXA,GAT,A,S,ATH,SPC,GM,CIP,AP,TE,C,SXT,AK

KF305710

s92

blood

750 bp

II

hypothetical protein

C

CRO,E,CD,PG,OXA,AS,SPC,AP,TE

KF411136

s105

wound

1230 bp

II

dhfrA1-sat2

C

CRO,LEV,TN,E,CD,LZD,RP,PG,OXA,A,S,ATH,GM,AP,SXT

KJ769139

  1. a c chromosomal location, P plasmid location, CRO ceftriaxone, LEV levofloxacin, E erythromycin, CD clindamycin, TN tobramycin, PG penicillin G, LZD linezolid, OXA oxacillin, A amoxicillin, S streptomycin, ATH azithromycine, SPC spectinomycin, GM gentamycin, CIP ciprofloxacin, AP ampicillin, TE tetracycline, C chloramphenicol, SXT trimethoprim-sulfamethoxazole, AK amikacin
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BMC Microbiology

ISSN: 1471-2180

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