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Table 1 The most annotated taxons in UniProtKB/Swiss-Prot for ‘viral process’ (GO:0016032) subclasses

From: Representing virus-host interactions and other multi-organism processes in the Gene Ontology

Organism

Taxon ID

UniProtKB/Swiss-Prot annotations per taxon

Homo sapiens

9606

1626

Mus musculus

10090

249

Influenza A virus (strain A/Puerto Rico/8/1934 H1N1)

211044

195

Vaccinia virus (strain Western Reserve)

10254

147

Human cytomegalovirus (strain Merlin)

295027

130

Vaccinia virus (strain Copenhagen)

10249

130

Human immunodeficiency virus type 1 group M subtype B (isolate HXB2)

11706

126

Human cytomegalovirus (strain AD169)

10360

125

Variola virus (isolate Human/India/Ind3/1967)

587200

114

Rattus norvegicus

10116

101

Human herpesvirus 1 (strain 17)

10299

99

Human herpesvirus 8 type P (isolate GK18)

868565

93

Epstein-Barr virus (strain B95-8)

10377

92

Human herpesvirus 2 (strain HG52)

10315

92

Human adenovirus C serotype 2

10515

82

Epstein-Barr virus (strain AG876)

82830

81

Epstein-Barr virus (strain GD1)

10376

81

Bos taurus

9913

75

Arabidopsis thaliana

3702

67

Human adenovirus C serotype 5

28285

63

Varicella-zoster virus (strain Dumas)

28285

60

Equine herpesvirus 1 (strain Ab4p)

28285

58

Human SARS coronavirus

227859

56

T4 Bacteriophage

10665

53

  1. The annotation counts for each taxon includes manual and electronic annotation methods. The T4 bacteriophage annotation count is shown for comparison. Influenza and Human Immunodeficiency virus (HIV) are the focus of two Reactome pathways, accounting, in part, for their high annotation count. Counts taken on October 8th 2014