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Table 2 Nucleotide and allelic diversity in 11 housekeeping gene fragments

From: The evolution and population structure of Lactobacillus fermentum from different naturally fermented products as determined by multilocus sequence typing (MLST)

Locus Number of Mean G + C content (mol%) Pi 1 d N /d S 2
Alleles Polymorphic sites
clpX 11 11 53.24 0.00634 0
dnaA 9 12 48.26 0.01421 0
dnaK 12 13 56.5 0.0061 0
groEL 7 6 51.91 0.00416 0.2188
murC 12 12 55.16 0.00393 0.0812
murE 11 14 54.86 0.00768 0.0424
pepX 19 22 60.44 0.00769 0.2548
pyrG 10 10 54.61 0.0056 0.128
recA 12 11 56.27 0.00408 0
rpoB 11 7 52.63 0.00514 0.0683
uvrC 11 13 52.98 0.00618 0.1714
  1. 1 Mean pairwise nucleotide differences per site
  2. 2 d N /d S  = the ratio of nonsynonymous to synonymous substitutions