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Table 2 Genes upregulated in the inoculated P.gingivalis W83

From: Gene expression changes in Porphyromonas gingivalis W83 after inoculation in rat oral cavity

Locus no. Putative identificationα Cellular roleα Fold
PG0102 hypothetical protein   3.7076
PG2116 hypothetical protein   3.6850
PG1007 GntR family transcriptional regulator Regulatory functions: DNA interactions 3.6786
PG0265 hypothetical protein   3.3714
PG1008 hypothetical protein   3.3338
PG1510 hypothetical protein   3.0890
PG1009 hypothetical protein   3.0258
PG1655 hypothetical protein   2.8935
PG0132 hypothetical protein   2.7298
PG2114 hypothetical protein   2.6986
PG2064 hypothetical protein   2.5952
PG1010 ABC transporter, ATP-binding protein Transport and binding proteins: Unknown substrate 2.4885
PG0542 hypothetical protein   2.4794
PG1005 putative lipoprotein Cell envelope 2.4686
PG1514 glycerol dehydrogenase-related protein Unknown function: General 2.4537
PG0844 hypothetical protein   2.4324
PG0874 mobilizable transposon, int protein Mobile and extrachromosomal element functions: Transposon functions 2.4307
PG0507 hypothetical protein   2.4290
PG1357 hypothetical protein   2.3151
PG1410 hypothetical protein   2.3094
PG0617 hypothetical protein   2.2814
PG0855 hypothetical protein   2.2153
PG0009 ISPg5, transposase Orf1 Mobile and extrachromosomal element functions: Transposon functions 2.1609
PG0427 ISPg5, transposase Orf1 Mobile and extrachromosomal element functions: Transposon functions 2.1431
PG0942 ISPg5, transposase Orf1 Mobile and extrachromosomal element functions: Transposon functions 2.1424
PG0541 hypothetical protein   2.1291
PG1398 hypothetical protein   2.1216
PG1027 hypothetical protein   2.1204
PG0590 ISPg5, transposase Orf1 Mobile and extrachromosomal element functions: Transposon functions 2.1151
PG1006 hypothetical protein   2.1122
PG0340 hypothetical protein   2.1119
PG0256 CvpA family protein Unknown function: General 2.1090
PG0749 hypothetical protein   2.0834
PG1662 hypothetical protein   2.0788
PG2220 hypothetical protein   2.0771
PG1871 hypothetical protein   2.0589
PG2187 1,4-dihydroxy-2-naphthoate octaprenyltransferase Biosynthesis of cofactors, prosthetic groups, and carriers: Menaquinone and ubiquinone 2.0471
PG0410 hypothetical protein   2.0409
PG1233 hypothetical protein   2.0367
PG0325 hypothetical protein   2.0349
PG0409 hypothetical protein   2.0259
PG1513 phosphoribosyltransferase, putative/phosphoglycerate mutase family protein Energy metabolism: Other 2.0032
  1. αLocus number, identification and functional classification according to JCVI P.gingivalis genome database