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Table 3 Primers used in this study

From: Identification of RNAIII-binding proteins in Staphylococcus aureus using tethered RNAs and streptavidin aptamers based pull-down assay

Primer name

Sequence

tRSA-f

GCCGCCAGTGTGCTGGAATT

tRSA-r-EcoRI-BamHI

GCGGGATCCGATATCTGCAGAATTC

Vitro-RNAIII-f-EcoRI

GCG GAATTC AGATCACAGAGATGTGAT

Vitro-RNAIII-r-BamHI

GCG GGATCC AAGGCCGCGAGCTTGGGA

RNase III-f-BamHI

TAAAGGATCTCTAAACAAAAGAAAAGTGAGATAGTTAATC

RNase III-r-SmaI

TACCCCCGGGTTTAATTTGTTTTAATTGCTTATAGGCACTTTTAG

Hu-r-XhoI

CCG CTCGAG TTTTACAGCATCTTTTA

Hu-f-NcoI

CATG CCATGG GC AACAAAACAGATTT

FtsZ-f-NdeI

CGCCATATGTTAGAATTTGAAC

FtsZ-r-XhoI

CCGCTCGAGACGTCTTGTTCTTC

Era-f-Nde I

CCCATATGACAGAACATAAATCAGG

Era-r-Xho I

CCGCTCGAGTTAATCTTGGTCTTCAAC

Pyk-f-BamHI

CGCGGATCCATGAGAAAAACTAAAATTGT

Pyk-r-xhoI

GTTCTCGAGTTATAGTACGTTTGCATATCCTTC

WalR-f-NcoI

CCACCATGGCTAGAAAAGTTGTTGTAGTTG

WalR-r-XhoI

CTCCTCGAGCTCATGTTGTTGGAGGAAATATCCA

RNase J2-f-BamHI

CGCGGATCCATGAATAGTGAGTTTATATATGGACGGGTAACAAATTTAGG

RNase J2-r-XhoI

CCGCTCGAGTTAAATTTCAGAAATTACTGGAATAATCATAGGACGACG

CshA-f-BamHI

GGATCCATGCAAAATTTTAAAGAACTAGGGATTTCG

CshA-r-XhoI

CTCGAGTTTTTGATGGTCAGCAAATGTGCG

PNPase-f-BamHI

GAAGGATCCATGTCTCAAGAAAAGAAAGTTTTTAAAAC

PNPase-r-XhoI

GAACTCGAGTTCTTCTAATGCTCTGTGTGATGC

PfkA-f-BamHI

GCCGGATCCATGAAGAAAATTGCAGTTTTAACTAGTGGT

PfkA-r-XhoI

CCCCTCGAGTATAGATAACTTGTTAGCAAGTTCATAT

Enolase-f-BamHI

GAAGGATCCATGCCAATTATTACAGATGTTTACGC

Enolase-r-XhoI

GAACTCGAGTTTATCTAAGTTATAGAATGATTTGATACCG