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Table 9 Differences in expression of putative, secreted, cell wall-degradation genes during colonization of autoclaved maize kernels by wild type (WT) and strain Δfst1 a

From: Transcriptome changes in Fusarium verticillioides caused by mutation in the transporter-like gene FST1

FVEG ID b

Molecular function

P value c

Log 2 fold change d

 

Cellulose-degrading

  

05521

Glucosidase

0.0021

1.30

08733

Glycosidase

0.0010

1.35

09772

Glucosidase

0.0027

2.22

12965

Glycosidase

0.0004

1.93

13391

Glucosidase

0.0002

2.53

07232

Glucanase

0.0008

−1.32

01870

Glucosidase

0.0024

−1.80

11944

Glucanase

0.0009

−3.47

12142

Glucanase

0.0023

−1.74

13055

Glucosidase

0.0005

−1.31

12840

Glucanase

-

Δfst1e

10897

Glucanase

-

Δfst1

12594

Glucosidase

-

WT

 

Xylan-degrading

  

08344

Xylanase

0.0042

1.09

10098

Xylanase

0.0006

3.58

10625

Xylosidase

0.0006

1.69

12502

Xylanase

0.0006

1.19

13062

Xylanase

0.0055

1.18

13426

Xylosidase

0.0006

1.88

13578

Xylanase

0.0031

1.64

07261

Xylanase

0.0009

−1.42

13553

Xylanase

0.0068

−1.08

 

Pectin-degrading

  

04421

Galactosidase

0.0005

2.47

12299

Galactanase

8.3 E-06

2.02

08734

Pectic Lyase

0.0017

−2.76

11228

Pectinesterase

0.0095

−1.10

13516

Polygalacturonase

0.0023

−2.01

 

Xylan/pectin-degrading

  

05689

Arabinofuranosidase

0.0007

1.41

13426

Arabinofuranosidase

0.0006

1.88

07490

Glycosidase

2.2 E-06

−2.50

08421

arabinase

0.0004

−1.16

16349

Glycosidase

0.0002

−1.26

 

Starch-degrading

  

12681

Dextranase

0.0001

−1.62

14136

Glucosidase

9.4 E-05

−3.94

  1. aData were collected from cultures grown for 6 days.
  2. bFusarium Comparative Database (Broadinstitute.org).
  3. cP value from pairwise t-test of mean RPKM of Δfst1 and WT.
  4. dValues derived from the mean RPKM of Δfst1/WT.
  5. eTranscript only detected in WT or Δfst1 as designated.