Skip to main content

Table 1 Transcriptome analyses of 168 and 1A95 cell a

From: Hyperphosphorylation of DegU cancels CcpA-dependent catabolite repression of rocG in Bacillus subtilis

Gene b

Signal in 168

Signal in 1A95

Ratio (1A95/168)

ptsG

868.57

5437.79

6.26

ackA

392.94

2301.16

5.86

lctE

1031.06

5603.86

5.44

gntZ

209.03

947.25

4.53

sacP

194.83

680.86

3.49

dra

405.07

1210.64

2.99

yxkJ

339.75

991.7

2.92

resB

802.05

2072.13

2.58

rbsC

54.75

133.97

2.45

rocG

220.35

470.1

2.13

kdgA

87.12

161.59

1.85

rpe

657.61

1190.12

1.81

pdhA

2110.16

3796.04

1.80

rbsK

167.65

278.05

1.66

pfkA

2557.11

4158.71

1.63

rbsA

94.2

153.12

1.63

rbsR

178.33

280.61

1.57

pyk

2613.65

4060.8

1.55

licB

137.4

210.68

1.53

rbsD

55.17

83.13

1.51

ccpC

369.74

534.18

1.44

cydA

332.81

436.13

1.31

acuA

364.04

452.95

1.24

tpiA

3565.89

4427.84

1.24

eno

4240.4

5052.53

1.19

cccA

417.01

476.84

1.14

xynP

32.02

36.61

1.14

pgm

5078.95

5724.25

1.13

yxjC

81.09

91.33

1.13

iolB

44.32

48.99

1.11

pgk

5422.94

5971.13

1.10

ywlF

2421.27

2526.84

1.04

zwf

2672.83

2708.68

1.01

fbaA

5096.63

4798.53

0.94

gapA

7210.27

6348.19

0.88

pta

2607.11

2276.82

0.87

acoA

62.03

53.74

0.87

tkt

3921.21

3212.77

0.82

ywjH

4166.18

3188.41

0.77

fbp

739.27

516.33

0.70

alsS

5558.12

3623.65

0.65

alsD

6286.45

3471.86

0.55

pgi

5106.18

2565.71

0.50

gapB

258.35

99.25

0.38

acsA

1836.8

450.84

0.25

  1. aDetailed results are available in the ArrayExpress database [63] under accession number E-MTAB-2944.
  2. bSome representative genes under direct CcpA-dependent CCR [32], and selected genes (italic) of glycolysis, pentose phosphate, and branching fermentation pathways to lactate, acetoin, and acetate, are listed in descending order of ratio (1A95/168).