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Table 4 Actual and observed proportions of bacteria for two mock community samples containing L. iners and S. amnii

From: The truth about metagenomics: quantifying and counteracting bias in 16S rRNA studies

  Sample 1 Sample 2
Bacteria Observed Actual Observed Actual
A. vaginae 0.0% 0.0% 0.0% 0.0%
G. vaginalis 0.0 0.0 0.8 25.0
L. crispatus 0.0 0.0 0.0 0.0
L. iners 47.2 33.3 48.7 25.0
P. bivia 0.0 0.0 18.7 25.0
S. amnii 52.3 33.3 31.8 25.0
S. agalactiae 0.4 33.3 0.0 0.0