Table 4 Actual and observed proportions of bacteria for two mock community samples containing L. iners and S. amnii
From: The truth about metagenomics: quantifying and counteracting bias in 16S rRNA studies
Sample 1 | Sample 2 | |||
|---|---|---|---|---|
Bacteria | Observed | Actual | Observed | Actual |
A. vaginae | 0.0% | 0.0% | 0.0% | 0.0% |
G. vaginalis | 0.0 | 0.0 | 0.8 | 25.0 |
L. crispatus | 0.0 | 0.0 | 0.0 | 0.0 |
L. iners | 47.2 | 33.3 | 48.7 | 25.0 |
P. bivia | 0.0 | 0.0 | 18.7 | 25.0 |
S. amnii | 52.3 | 33.3 | 31.8 | 25.0 |
S. agalactiae | 0.4 | 33.3 | 0.0 | 0.0 |