From: The immediate global responses of Aliivibrio salmonicida to iron limitations
CDS | Gene | Product 1 | Fold change 2 | p-value 2 |
---|---|---|---|---|
Transport/binding proteins | ||||
VSAL_I1734 | Â | heme receptor (pseudogene) | 1.5 | 0.03 |
VSAL_I1751 | tonB1 | TonB protein (pseudogene) | 5.0 | 0 |
VSAL_I1752 | exbB1 | TonB system transport protein | 2.4 | 0.01 |
VSAL_I1754 | hmuT | heme transporter protein, putative periplasmic binding protein | 4.3 | 0 |
VSAL_I2257 | feoA | ferrous iron transport protein FeoA | 1.8 | 0.06 |
VSAL_I2258 | feoB | ferrous iron transport protein FeoB | 1.8 | 0.07 |
VSAL_I2259 | feoC | ferrous iron transport protein FeoC | 1.8 | 0 |
VSAL_I2588 | fbpA | iron(III) ABC transporter, periplasmic iron-compound-binding protein | 2.1 | 0.08 |
VSAL_II0110 | Â | TonB dependent receptor | 3.4 | 0 |
VSAL_II0112 | tolR2 | biopolymer transport protein | 2.0 | 0 |
VSAL_II0150 | fhuC | ferrichrome transport ATP-binding protein | 3.2 | 0 |
VSAL_II0151 | fhuD | ferrichrome-binding periplasmic protein | 3.2 | 0.01 |
VSAL_II0909 | bfrH | ferrioxamine B receptor | 3.3 | 0 |
VSAL_p320_27 | Â | iron ion ABC transporter, periplasmic component | 2.4 | 0.01 |
VSAL_p320_29 | Â | iron ion ABC transporter ATP-binding protein | 1.7 | 0.07 |
Adaptation | ||||
VSAL_I1749 | huvX | heme uptake and utilization protein | 1.7 | 0 |
Biosynthesis of cofactors, carriers | ||||
VSAL_I0134 | bibA* | Bisucaberin siderophore biosynthesis protein A | 7.6 | 0 |
VSAL_I0135 | bibB* | Bisucaberin siderophore biosynthesis protein B | 5.8 | 0.01 |
VSAL_I0136 | bibC* | Bisucaberin siderophore biosynthesis protein C | 1.9 | 0.06 |
VSAL_I1750 | phuW | putative coproporphyrinogen oxidase | 2.2 | 0 |
Cell envelope | ||||
VSAL_I1248 | Â | membrane protein | 2.9 | 0 |
VSAL_I1785 | Â | putative exported protein | 2.2 | 0 |
VSAL_I1786 | Â | putative iron-regulated protein | 2.8 | 0 |
VSAL_I1864 | Â | putative outer membrane protein | 4.2 | 0 |
VSAL_II0074 | Â | membrane protein | 3.4 | 0 |
VSAL_II0111 | Â | putative exported protein | 2.3 | 0 |
VSAL_II0717 | Â | putative membrane protein | 1.6 | 0.02 |
VSAL_II0868 | Â | putative lipoprotein | 3.4 | 0 |
sRNA | ||||
VSAL_I3102s | Â | VSsrna22 small RNA RyhB | 4.6 | 0 |
Unknown function, no known homologues | ||||
VSAL_I2980 | Â | hypothetical protein | 1.5 | 0.1 |
VSAL_I2892 | Â | hypothetical protein | 3.7 | 0 |
VSAL_II0148 | Â | hypothetical protein | 3.8 | 0 |