Table 1 Tc1-Mariner elements identified in the genome of S. sclerotiorum
Family | Actives | Inactives | Number of elements | Length of elements (Kb) | Length of TIRs | Number of introns/transcripts detected | Length of transposase (aa) |
|---|---|---|---|---|---|---|---|
Mariner-1_SS | 6 | 22 | 28 | 1.8-2.3 | 59 | 1/2 | 558-543 |
Mariner-2_SS | 8 | 17 | 25 | 1.8-2.1 | 49 | 1/2 | 453-502 |
Mariner-3_SS | 6 | 7 | 13 | 1.8-2.1 | 62 | 1/2 | 506 |
Mariner-4_SS | 14 | 2 | 16 | 1.8-2.0 | 61 | 1/2 | 501-548 |
Mariner-5_SS | 2 | 4 | 6 | 1.8 | 48 | 0/1 | 551 |
Mariner-6_SS | 1 | 5 | 6 | 1.8-2.1 | 53 | 0/1 | 490 |
Mariner-7_SS | 1 | 4 | 5 | 1.8-2.1 | 54 | 0/1 | 548 |
Mariner-8_SS | 0 | 1 | 1 | 2.1 | 36 | 0/0 | - |
Mariner-9_SS | 2 | 13 | 15 | 1.8-2.2 | 57 | 0/1 | 552 |
Mariner-10_SS | 1 | 5 | 6 | 1.8-2.3 | 56 | 0/1 | 503 |
Mariner-11_SS | 1 | 3 | 4 | 1.4-1.8 | 70 | 0/1 | 491 |
Mariner-12_SS | 4 | 9 | 13 | 1.8-2.0 | 44 | 1/2 | 482 |
Mariner-13_SS | 1 | 4 | 5 | 1.8-1.9 | 66 | 0/1 | 574 |
Mariner-14_SS | 0 | 3 | 3 | 1.8-2.0 | 48 | 0/0 | - |
TcMar-Pogo | 3 | 1 | 4 | 1.8 | 48 | 1/1 | 494 |