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Table 2 Summary of metagenomic contig assembly

From: The presence of nitrate dramatically changed the predominant microbial community in perchlorate degrading cultures under saline conditions

 

P30 culture

NP30 culture

Number of 36-mer reads collected

7,551,046

6,307,535

Number of assembled contigs

42,437

27,725

Number of nucleotides in contigs > 100nt

9,850,121

5,030,930

Longest sequence, nt

3,421

5,099

Mean, nt

232

181

N50, nt

258

183

Shortest sequence, nt

100

100