From: Microarray analysis of the transcriptional responses of Porphyromonas gingivalis to polyphosphate
Locus no.a | Putative identificationa | Avg fold differenceb |
---|---|---|
Energy metabolism : Amino acids and amines | ||
PG1269 | Delta-1-pyrroline-5-carboxylate dehydrogenase | −2.02 |
PG0474 | Low-specificity L-threonine aldolase | −1.93 |
PG1401 | Beta-eliminating lyase | −1.74 |
PG0343 | Methionine gamma-lyase | −1.64 |
PG1559 | Aminomethyltransferase | −1.54 |
PG0324 | Histidine ammonia-lyase | −1.53 |
PG1305 | Glycine dehydrogenase | −1.52 |
PG2121 | L-asparaginase | −1.51 |
PG0025 | Fumarylacetoacetate hydrolase family protein | 2.11 |
Energy metabolism : Anaerobic/Fermentation | ||
PG0687 | Succinate-semialdehyde dehydrogenase | −1.76 |
PG0690 | 4-hydroxybutyrate CoA-transferase | −1.66 |
PG0689 | NAD-dependent 4-hydroxybutyrate dehydrogenase | −1.58 |
PG1609 | Methylmalonyl-CoA decarboxylase, gamma subunit | −1.87 |
PG1612 | Methylmalonyl-CoA decarboxylase, alpha subunit | −1.71 |
PG1608 | Methylmalonyl-CoA decarboxylase, beta subunit | −1.64 |
PG0675 | Indolepyruvate ferredoxin oxidoreductase, alpha subunit | −1.53 |
PG1809 | 2-oxoglutarate oxidoreductase, gamma subunit | 2.18 |
PG1956 | 4-hydroxybutyrate CoA-transferase | 1.74 |
Energy metabolism : Biosynthesis and degradation of polysaccharides | ||
PG2145 | Polysaccharide deacetylase | −1.94 |
PG0897 | Alpha-amylase family protein | −1.85 |
PG1793 | 1,4-alpha-glucan branching enzyme | −1.67 |
Energy metabolism : Electron transport | ||
PG0776 | Electron transfer flavoprotein, alpha subunit | −2.30 |
PG0777 | Electron transfer flavoprotein, beta subunit | −1.91 |
PG1638 | Thioredoxin family protein | −1.88 |
PG1332 | NAD(P) transhydrogenase, beta subunit | −1.83 |
PG1119 | Flavodoxin, putative | −1.69 |
PG0429 | Pyruvate synthase | −1.64 |
PG1077 | Electron transfer flavoprotein, beta subunit | −1.57 |
PG1858 | Flavodoxin | −2.57 |
PG2178 | NADH:ubiquinone oxidoreductase, Na translocating, E subunit | −1.51 |
PG0034 | Thioredoxin | 2.76 |
PG0195 | Rubrerythrin | 15.49 |
PG0548 | Pyruvate ferredoxin/flavodoxin oxidoreductase family protein | 2.58 |
PG0616 | Thioredoxin, putative | 1.52 |
PG1421 | Ferredoxin, 4Fe-4S | 28.54 |
PG1813 | Ferredoxin, 4Fe-4S | 1.65 |
Energy metabolism : Glycolysis/gluconeogenesis | ||
PG0130 | Phosphoglyceromutase | −1.68 |
Energy metabolism : Purines, pyrimidines, nucleosides, and nucleotides | ||
PG1996 | Deoxyribose-phosphate aldolase | −1.73 |
Energy metabolism : Pentose phosphate pathway | ||
PG1747 | Ribose 5-phosphate isomerase B, putative | −2.45 |
PG0230 | Transaldolase | 2.05 |
PG1595 | Ribulose-phosphate 3-epimerase | 2.22 |
Energy metabolism: Sugars | ||
PG1633 | Galactokinase | −1.89 |
Energy metabolism : TCA cycle | ||
PG1614 | Succinate dehydrogenase | 2.25 |
PG1615 | Succinate dehydrogenase | 1.60 |
Energy metabolism : Other | ||
PG1522 | Mandelate racemase/muconate lactonizing enzyme family protein | −2.24 |
PG0279 | NADP-dependent malic enzyme | 1.82 |
PG1017 | Pyruvate phosphate dikinase | 1.75 |
PG1513 | Phosphoribosyltransferase, putative/phosphoglycerate mutase family protein | 3.05 |
PG1859 | Glycerate kinase family protein | 1.76 |
Biosynthesis of pyridine nucleotides | ||
PG0058 | Nicotinic acid mononucleotide adenyltransferase | −1.93 |
PG1578 | Quinolinate synthetase | −1.62 |
PG0057 | Nicotinate phosphoribosyltransferase | −1.61 |
PG0678 | Pyrazinamidase/nicotinamidase, putative | 2.00 |
Biosynthesis of menaquinone and ubiquinone | ||
PG1870 | Methlytransferase, UbiE/COQ5 family | −2.60 |
PG1467 | Methlytransferase, UbiE/COQ5 family | −2.46 |
PG1523 | Naphthoate synthase | −1.89 |
PG1521 | O-succinylbenzoic acid--CoA ligase | −1.78 |
PG1525 | Isochorismate synthase, putative | −1.50 |