Skip to main content

Table 2 DNA Primers used

From: DNA polymorphism analysis of Brucella lipopolysaccharide genes reveals marked differences in O-polysaccharide biosynthetic genes between smooth and rough Brucella species and novel species-specific markers

Target DNA

Primer name

Sequence (5'-3')

Amplicon size

manAO-Ag

manA-A

CATCACCATCGTTCAGAGCA

1804 bp

 

manA-B

GCCAGGGGAAATGATAATGA

 

manBO-Ag

manB-A

GTTGGCAGAAGTTGGCATCG

2091 bp

 

manB-B

CTAATGCCTGTTCCGCCACC

 

manCO-Ag

manC-A

TTGAAGACTGGTTTATTGCG

2210 bp

 

manC-B

GCAAGACTGCCATAGAAACC

 

wbkE

wbkE-A

CCGCAAACTGAATGGATAAA

2452 bp

 

wbkE-B

GCAACTGTCAGGTCTGGTGC

 

wbkF

wecA-A

GCGGAGGAATGGACAAGGAC

1234 bp

 

wecA-B

AGGAAAGCCTGGCGGTACTG

 

wbkD

wbkD-A

TGGCTGGAGTGTGCCGAAAG

2165 bp

 

wbkD-B

ACGGTTGCTGGTGCTTGTGG

 

wa**

wa**-A

CATCACGCATAATGACACCG

2342 bp

 

wa**-B

TGCTTTTGACAAGCTCGTCG

 

manBcore

manBcore-A

CCAGCCGACGATTGAACTGG

1589 bp

 

manBcore-B

AAGCCTTGAACCCGATCCCC

 

wboA

wboA-A

TCTGCATAACGGTCCTTGCC

1334 bp

 

wboA-B

GCTTTTACGGCAACAAGTCC

 

wboB

wboB-A

CTTGGGATGCGAAACTACCG

1656 bp

 

wboB-B

GCTCACGCTTCCGAATACTG