Skip to main content

Advertisement

Table 1 Predicted function and/or characteristics of the putative proteins encoded by the ORFs present in the hox chromosome region of Lyngbya majucula CCAP 1446/4

From: Transcription profiles of hydrogenases related genes in the cyanobacterium Lyngbya majuscula CCAP 1446/4

ORF Putative function/characteristics of the encoded protein
ORF13 (partial) POR_N, pfam01855: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-dinding domain; belongs to NifJ (nitrogen fixation) family
hoxE PRK07571: Bidirectional hydrogenase complex protein HoxE
hoxF PRK11278: NADH dehydrogenase I subunit F
Hcp cd01914: H ybrid c luster p rotein (prismane protein); hydroxylamine reductase activity and possible role the nitrogen metabolism; specific function unknown
hoxU PRK07569: Bidirectional hydrogenase complex protein HoxU
hoxY COG3260: NiFe-hydrogenase small subunit
hoxH COG3261: NiFe-hydrogenase large subunit
ORF14 Hypothetical protein; 3 predicted transmembrane helixes
xisH pfam08814: XisH, required for excision of a DNA element within fdxN
xisI pfam08869: XisI, required for excision of a DNA element within fdxN
ORF15 Hypothetical protein; no putative conserved domains detected, nor relevant homologies found in cyanobacteria
ORF16 Hypothetical protein; no putative conserved domains detected, nor relevant homologies found in cyanobacteria
hoxW COG0680: NiFe-hydrogenase maturation factor
cl00477: HycI, hydrogenase maturation protease
ORF17 DUF820, pfam05685: hypothetical protein; conserved in cyanobacteria
COG4636, Uma2 family: Restriction endonuclease fold
ORF18 COG4067: hypothetical protein; conserved in Archaea [Posttranslational modification, protein turnover, chaperones]
DUF785, pfam05618: hypothetical protein
ORF19 (partial) DUF1400, pfam07176: Alpha/beta hydrolase of unknown function